Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA1Q9UND3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA1Q9UND3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 C1orf229-201ENST00000623686 2258 ntBASIC19.89■□□□□ 0.77
NPIPA1Q9UND3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA1Q9UND3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPA1Q9UND3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.86■□□□□ 0.77
NPIPA1Q9UND3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 AC087239.1-201ENST00000622671 572 ntBASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 AC068587.7-201ENST00000641602 218 ntBASIC19.85■□□□□ 0.77
NPIPA1Q9UND3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms