Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 AL034346.1-201ENST00000568244 1277 ntBASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 C1orf229-201ENST00000623686 2258 ntBASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBQLN1Q9UMX0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.24■■□□□ 1.31
UBQLN1Q9UMX0 AC139530.1-201ENST00000575312 1977 ntBASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBQLN1Q9UMX0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 AC079140.4-201ENST00000507448 529 ntBASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
UBQLN1Q9UMX0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 AC022517.1-201ENST00000592429 346 ntBASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
UBQLN1Q9UMX0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.2■■□□□ 1.3
UBQLN1Q9UMX0 AC127496.7-201ENST00000625110 1798 ntBASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 AC055733.4-201ENST00000638462 1354 ntBASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
UBQLN1Q9UMX0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 AP004607.4-201ENST00000530158 1459 ntBASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms