Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.53■■□□□ 1.04
NCDNQ9UBB6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCDNQ9UBB6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCDNQ9UBB6 AC005224.4-201ENST00000583262 1652 ntBASIC21.53■■□□□ 1.04
NCDNQ9UBB6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.53■■□□□ 1.04
NCDNQ9UBB6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCDNQ9UBB6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.52■■□□□ 1.04
NCDNQ9UBB6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NCDNQ9UBB6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NCDNQ9UBB6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NCDNQ9UBB6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.52■■□□□ 1.03
NCDNQ9UBB6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 MIR1224-201ENST00000408193 85 ntBASIC21.51■■□□□ 1.03
NCDNQ9UBB6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCDNQ9UBB6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCDNQ9UBB6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.5■■□□□ 1.03
NCDNQ9UBB6 AC004687.1-201ENST00000579003 1625 ntBASIC21.5■■□□□ 1.03
NCDNQ9UBB6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCDNQ9UBB6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCDNQ9UBB6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCDNQ9UBB6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCDNQ9UBB6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCDNQ9UBB6 OXCT2P1-201ENST00000447263 1535 ntBASIC21.5■■□□□ 1.03
NCDNQ9UBB6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 AC092118.2-201ENST00000613495 667 ntBASIC21.49■■□□□ 1.03
NCDNQ9UBB6 AC142381.3-201ENST00000568208 1670 ntBASIC21.49■■□□□ 1.03
NCDNQ9UBB6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCDNQ9UBB6 AC009237.3-201ENST00000393279 1427 ntBASIC21.48■■□□□ 1.03
NCDNQ9UBB6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCDNQ9UBB6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NCDNQ9UBB6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.48■■□□□ 1.03
NCDNQ9UBB6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.48■■□□□ 1.03
NCDNQ9UBB6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.48■■□□□ 1.03
NCDNQ9UBB6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NCDNQ9UBB6 AC013268.1-206ENST00000638368 961 ntBASIC21.48■■□□□ 1.03
NCDNQ9UBB6 AC112229.1-201ENST00000639295 961 ntBASIC21.48■■□□□ 1.03
NCDNQ9UBB6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NCDNQ9UBB6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.48■■□□□ 1.03
NCDNQ9UBB6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 CYP2T1P-201ENST00000432607 1285 ntBASIC21.47■■□□□ 1.03
NCDNQ9UBB6 AC128676.1-201ENST00000454392 318 ntBASIC21.47■■□□□ 1.03
NCDNQ9UBB6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NCDNQ9UBB6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 AC008694.1-202ENST00000636953 945 ntBASIC21.46■■□□□ 1.03
NCDNQ9UBB6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.46■■□□□ 1.03
NCDNQ9UBB6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.03
NCDNQ9UBB6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.45■■□□□ 1.02
NCDNQ9UBB6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms