Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC31.35■■■□□ 2.61
SLC52A1Q9NWF4 AC105036.2-201ENST00000569468 176 ntBASIC31.35■■■□□ 2.61
SLC52A1Q9NWF4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.35■■■□□ 2.61
SLC52A1Q9NWF4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 SLC7A5P1-201ENST00000568957 537 ntBASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.34■■■□□ 2.61
SLC52A1Q9NWF4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 ABCB10P4-201ENST00000566803 2184 ntBASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC31.33■■■□□ 2.61
SLC52A1Q9NWF4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.61
SLC52A1Q9NWF4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
SLC52A1Q9NWF4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLC52A1Q9NWF4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 AC079089.2-201ENST00000531211 1277 ntBASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SLC52A1Q9NWF4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.3■■■□□ 2.6
SLC52A1Q9NWF4 FAM201B-201ENST00000458407 597 ntBASIC31.3■■■□□ 2.6
SLC52A1Q9NWF4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SLC52A1Q9NWF4 AC098934.4-201ENST00000564127 592 ntBASIC31.3■■■□□ 2.6
SLC52A1Q9NWF4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.3■■■□□ 2.6
SLC52A1Q9NWF4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SLC52A1Q9NWF4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC52A1Q9NWF4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SLC52A1Q9NWF4 FXN-202ENST00000396364 980 ntTSL 5 BASIC31.29■■■□□ 2.6
SLC52A1Q9NWF4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC52A1Q9NWF4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC52A1Q9NWF4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.29■■■□□ 2.6
SLC52A1Q9NWF4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.29■■■□□ 2.6
SLC52A1Q9NWF4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 AC013268.1-206ENST00000638368 961 ntBASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 AC112229.1-201ENST00000639295 961 ntBASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.28■■■□□ 2.6
SLC52A1Q9NWF4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC52A1Q9NWF4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC52A1Q9NWF4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC52A1Q9NWF4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC52A1Q9NWF4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SLC52A1Q9NWF4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC31.26■■■□□ 2.59
SLC52A1Q9NWF4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SLC52A1Q9NWF4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SLC52A1Q9NWF4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SLC52A1Q9NWF4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.25■■■□□ 2.59
SLC52A1Q9NWF4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC31.25■■■□□ 2.59
SLC52A1Q9NWF4 MARS-234ENST00000630571 216 ntTSL 5 BASIC31.25■■■□□ 2.59
SLC52A1Q9NWF4 MARS-235ENST00000630803 183 ntTSL 3 BASIC31.25■■■□□ 2.59
SLC52A1Q9NWF4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 TERF1P5-201ENST00000477545 1207 ntBASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 AC007322.4-201ENST00000509611 723 ntBASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 MIR4758-201ENST00000577688 71 ntBASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
SLC52A1Q9NWF4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
SLC52A1Q9NWF4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms