Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 AC010997.5-201ENST00000609182 354 ntBASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 AC080038.3-201ENST00000623346 1952 ntBASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB16Q9NRJ7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB16Q9NRJ7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB16Q9NRJ7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHB16Q9NRJ7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB16Q9NRJ7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB16Q9NRJ7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 AL035685.1-201ENST00000636663 812 ntBASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB16Q9NRJ7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB16Q9NRJ7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 AC004687.1-201ENST00000579003 1625 ntBASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 C17orf82-201ENST00000623772 1530 ntBASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB16Q9NRJ7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB16Q9NRJ7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms