Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRAC1Q9NRG0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CHRAC1Q9NRG0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CHRAC1Q9NRG0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 SLC47A1P1-202ENST00000449666 945 ntBASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRAC1Q9NRG0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 AC010141.3-201ENST00000456659 717 ntBASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.75■■□□□ 1.07
CHRAC1Q9NRG0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 OR7E47P-201ENST00000546390 1422 ntBASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 UNC93B3-201ENST00000308076 687 ntBASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHRAC1Q9NRG0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 AC087239.1-201ENST00000622671 572 ntBASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHRAC1Q9NRG0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHRAC1Q9NRG0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHRAC1Q9NRG0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.72■■□□□ 1.07
CHRAC1Q9NRG0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.72■■□□□ 1.07
CHRAC1Q9NRG0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHRAC1Q9NRG0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.72■■□□□ 1.07
CHRAC1Q9NRG0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 AC026471.6-201ENST00000622954 1905 ntBASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHRAC1Q9NRG0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRAC1Q9NRG0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRAC1Q9NRG0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRAC1Q9NRG0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRAC1Q9NRG0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRAC1Q9NRG0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRAC1Q9NRG0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms