Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 AC004687.1-201ENST00000579003 1625 ntBASIC20.23■□□□□ 0.83
KLHL1Q9NR64 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KLHL1Q9NR64 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 AC034268.1-201ENST00000441047 882 ntBASIC20.22■□□□□ 0.83
KLHL1Q9NR64 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KLHL1Q9NR64 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 AL353803.4-201ENST00000565882 1934 ntBASIC20.21■□□□□ 0.83
KLHL1Q9NR64 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 AL354811.1-201ENST00000610286 706 ntBASIC20.21■□□□□ 0.83
KLHL1Q9NR64 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
KLHL1Q9NR64 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
KLHL1Q9NR64 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 AP005435.1-201ENST00000529293 1178 ntBASIC20.2■□□□□ 0.82
KLHL1Q9NR64 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.2■□□□□ 0.82
KLHL1Q9NR64 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KLHL1Q9NR64 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 AC027612.3-201ENST00000413684 1047 ntBASIC20.18■□□□□ 0.82
KLHL1Q9NR64 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.18■□□□□ 0.82
KLHL1Q9NR64 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms