Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.73■■□□□ 1.71
NBPF3Q9H094 MIR6084-201ENST00000622012 110 ntBASIC25.73■■□□□ 1.71
NBPF3Q9H094 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NBPF3Q9H094 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
NBPF3Q9H094 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.73■■□□□ 1.71
NBPF3Q9H094 GUSBP5-202ENST00000510805 1989 ntBASIC25.73■■□□□ 1.71
NBPF3Q9H094 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NBPF3Q9H094 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
NBPF3Q9H094 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NBPF3Q9H094 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NBPF3Q9H094 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NBPF3Q9H094 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NBPF3Q9H094 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NBPF3Q9H094 AC012414.1-201ENST00000556676 535 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4L2-201ENST00000561772 1275 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4L6-201ENST00000626483 1275 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4L1-201ENST00000627662 1275 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4L8-201ENST00000629013 1275 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4L3-201ENST00000630187 1275 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4L7-201ENST00000630678 1275 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 DUX4L5-201ENST00000630834 1275 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NBPF3Q9H094 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.72■■□□□ 1.71
NBPF3Q9H094 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.72■■□□□ 1.71
NBPF3Q9H094 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.71■■□□□ 1.71
NBPF3Q9H094 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
NBPF3Q9H094 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 AC105233.4-201ENST00000642045 216 ntBASIC25.71■■□□□ 1.71
NBPF3Q9H094 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.71■■□□□ 1.71
NBPF3Q9H094 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
NBPF3Q9H094 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
NBPF3Q9H094 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
NBPF3Q9H094 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NBPF3Q9H094 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.7■■□□□ 1.71
NBPF3Q9H094 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
NBPF3Q9H094 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.7■■□□□ 1.7
NBPF3Q9H094 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NBPF3Q9H094 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
NBPF3Q9H094 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NBPF3Q9H094 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.7■■□□□ 1.7
NBPF3Q9H094 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.7■■□□□ 1.7
NBPF3Q9H094 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NBPF3Q9H094 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NBPF3Q9H094 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NBPF3Q9H094 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
NBPF3Q9H094 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
NBPF3Q9H094 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NBPF3Q9H094 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
NBPF3Q9H094 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NBPF3Q9H094 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NBPF3Q9H094 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NBPF3Q9H094 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
NBPF3Q9H094 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NBPF3Q9H094 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NBPF3Q9H094 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NBPF3Q9H094 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.68■■□□□ 1.7
NBPF3Q9H094 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NBPF3Q9H094 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.68■■□□□ 1.7
NBPF3Q9H094 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.68■■□□□ 1.7
NBPF3Q9H094 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NBPF3Q9H094 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NBPF3Q9H094 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NBPF3Q9H094 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.67■■□□□ 1.7
NBPF3Q9H094 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NBPF3Q9H094 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
NBPF3Q9H094 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
NBPF3Q9H094 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.66■■□□□ 1.7
NBPF3Q9H094 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NBPF3Q9H094 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NBPF3Q9H094 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
NBPF3Q9H094 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms