Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS4Q9BT78 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS4Q9BT78 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS4Q9BT78 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 BX664725.1-201ENST00000438252 379 ntBASIC19.73■□□□□ 0.75
COPS4Q9BT78 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.73■□□□□ 0.75
COPS4Q9BT78 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
COPS4Q9BT78 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.73■□□□□ 0.75
COPS4Q9BT78 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS4Q9BT78 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS4Q9BT78 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS4Q9BT78 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COPS4Q9BT78 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.72■□□□□ 0.75
COPS4Q9BT78 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS4Q9BT78 Z98882.1-201ENST00000622160 2253 ntBASIC19.72■□□□□ 0.75
COPS4Q9BT78 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 LINC01521-201ENST00000504184 1943 ntBASIC19.71■□□□□ 0.75
COPS4Q9BT78 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.71■□□□□ 0.75
COPS4Q9BT78 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COPS4Q9BT78 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPS4Q9BT78 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COPS4Q9BT78 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COPS4Q9BT78 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COPS4Q9BT78 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPS4Q9BT78 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COPS4Q9BT78 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.7■□□□□ 0.74
COPS4Q9BT78 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS4Q9BT78 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPS4Q9BT78 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COPS4Q9BT78 AF106564.1-201ENST00000607058 2553 ntBASIC19.7■□□□□ 0.74
COPS4Q9BT78 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS4Q9BT78 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COPS4Q9BT78 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPS4Q9BT78 AC021242.3-201ENST00000607598 1377 ntBASIC19.69■□□□□ 0.74
COPS4Q9BT78 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
COPS4Q9BT78 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 FEM1AP4-201ENST00000443167 1987 ntBASIC19.68■□□□□ 0.74
COPS4Q9BT78 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPS4Q9BT78 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.68■□□□□ 0.74
COPS4Q9BT78 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.68■□□□□ 0.74
COPS4Q9BT78 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.68■□□□□ 0.74
COPS4Q9BT78 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.68■□□□□ 0.74
COPS4Q9BT78 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS4Q9BT78 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.67■□□□□ 0.74
COPS4Q9BT78 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms