Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 MIR6724-1-201ENST00000616420 92 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 MIR6724-2-201ENST00000616483 92 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 MIR6724-4-201ENST00000617390 92 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 MIR6724-3-201ENST00000622482 92 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 AC241377.3-202ENST00000626088 1088 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 AC241585.3-202ENST00000628937 1088 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 AC245100.8-202ENST00000629247 1058 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 FEM1AP4-201ENST00000443167 1987 ntBASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.32■□□□□ 0.84
CPPED1Q9BRF8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.31■□□□□ 0.84
CPPED1Q9BRF8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 AF106564.1-201ENST00000607058 2553 ntBASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPPED1Q9BRF8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 UNC93B8-201ENST00000511903 705 ntBASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
CPPED1Q9BRF8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 pRNA.6-201ENST00000610482 90 ntBASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 pRNA.5-201ENST00000612139 90 ntBASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 pRNA.11-201ENST00000618423 90 ntBASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 pRNA.13-201ENST00000619112 90 ntBASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPPED1Q9BRF8 OR7E47P-201ENST00000546390 1422 ntBASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CPPED1Q9BRF8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CPPED1Q9BRF8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPPED1Q9BRF8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPPED1Q9BRF8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms