Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA3Q99758 AC093787.1-201ENST00000450396 207 ntBASIC29.27■■■□□ 2.28
ABCA3Q99758 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC29.27■■■□□ 2.28
ABCA3Q99758 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC29.27■■■□□ 2.28
ABCA3Q99758 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC29.27■■■□□ 2.28
ABCA3Q99758 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC29.27■■■□□ 2.28
ABCA3Q99758 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
ABCA3Q99758 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC29.27■■■□□ 2.28
ABCA3Q99758 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
ABCA3Q99758 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA3Q99758 BET1L-204ENST00000410108 637 ntTSL 3 BASIC29.26■■■□□ 2.27
ABCA3Q99758 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC29.26■■■□□ 2.27
ABCA3Q99758 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA3Q99758 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC29.26■■■□□ 2.27
ABCA3Q99758 PLLP-204ENST00000569059 665 ntTSL 3 BASIC29.26■■■□□ 2.27
ABCA3Q99758 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA3Q99758 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA3Q99758 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.26■■■□□ 2.27
ABCA3Q99758 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
ABCA3Q99758 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC29.25■■■□□ 2.27
ABCA3Q99758 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA3Q99758 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC29.25■■■□□ 2.27
ABCA3Q99758 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.25■■■□□ 2.27
ABCA3Q99758 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA3Q99758 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
ABCA3Q99758 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA3Q99758 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC29.25■■■□□ 2.27
ABCA3Q99758 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC29.25■■■□□ 2.27
ABCA3Q99758 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC29.25■■■□□ 2.27
ABCA3Q99758 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA3Q99758 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA3Q99758 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ABCA3Q99758 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.24■■■□□ 2.27
ABCA3Q99758 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA3Q99758 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
ABCA3Q99758 GAS7-202ENST00000396115 929 ntTSL 5 BASIC29.24■■■□□ 2.27
ABCA3Q99758 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC29.24■■■□□ 2.27
ABCA3Q99758 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA3Q99758 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC29.24■■■□□ 2.27
ABCA3Q99758 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC29.23■■■□□ 2.27
ABCA3Q99758 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
ABCA3Q99758 AL353803.4-201ENST00000565882 1934 ntBASIC29.23■■■□□ 2.27
ABCA3Q99758 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA3Q99758 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
ABCA3Q99758 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ABCA3Q99758 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC29.23■■■□□ 2.27
ABCA3Q99758 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC29.23■■■□□ 2.27
ABCA3Q99758 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC29.22■■■□□ 2.27
ABCA3Q99758 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA3Q99758 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA3Q99758 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA3Q99758 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC29.22■■■□□ 2.27
ABCA3Q99758 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC29.22■■■□□ 2.27
ABCA3Q99758 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA3Q99758 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.22■■■□□ 2.27
ABCA3Q99758 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ABCA3Q99758 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC29.21■■■□□ 2.27
ABCA3Q99758 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA3Q99758 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC29.21■■■□□ 2.27
ABCA3Q99758 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA3Q99758 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA3Q99758 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC29.21■■■□□ 2.27
ABCA3Q99758 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA3Q99758 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
ABCA3Q99758 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
ABCA3Q99758 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC29.2■■■□□ 2.27
ABCA3Q99758 RHEB-204ENST00000472642 900 ntTSL 3 BASIC29.2■■■□□ 2.27
ABCA3Q99758 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC29.2■■■□□ 2.27
ABCA3Q99758 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
ABCA3Q99758 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ABCA3Q99758 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
ABCA3Q99758 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
ABCA3Q99758 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC29.2■■■□□ 2.26
ABCA3Q99758 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.19■■■□□ 2.26
ABCA3Q99758 NAA20-201ENST00000310450 920 ntTSL 2 BASIC29.19■■■□□ 2.26
ABCA3Q99758 BMP1-204ENST00000397814 836 ntTSL 4 BASIC29.19■■■□□ 2.26
ABCA3Q99758 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
ABCA3Q99758 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC29.19■■■□□ 2.26
ABCA3Q99758 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC29.19■■■□□ 2.26
ABCA3Q99758 OR10C1-204ENST00000622521 1039 ntBASIC29.19■■■□□ 2.26
ABCA3Q99758 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
ABCA3Q99758 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC29.19■■■□□ 2.26
ABCA3Q99758 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA3Q99758 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC29.18■■■□□ 2.26
ABCA3Q99758 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC29.18■■■□□ 2.26
ABCA3Q99758 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ABCA3Q99758 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC29.18■■■□□ 2.26
ABCA3Q99758 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA3Q99758 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC29.17■■■□□ 2.26
ABCA3Q99758 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA3Q99758 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC29.17■■■□□ 2.26
ABCA3Q99758 IRX5-204ENST00000560154 879 ntTSL 5 BASIC29.17■■■□□ 2.26
ABCA3Q99758 EEF1DP3-203ENST00000566025 782 ntBASIC29.17■■■□□ 2.26
ABCA3Q99758 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC29.17■■■□□ 2.26
ABCA3Q99758 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA3Q99758 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC29.17■■■□□ 2.26
ABCA3Q99758 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ABCA3Q99758 AL596275.1-201ENST00000423464 877 ntBASIC29.17■■■□□ 2.26
ABCA3Q99758 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
ABCA3Q99758 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms