Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 AC092666.2-201ENST00000613287 246 ntBASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDK5RAP1Q96SZ6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 AC079140.4-201ENST00000507448 529 ntBASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDK5RAP1Q96SZ6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CDK5RAP1Q96SZ6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDK5RAP1Q96SZ6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDK5RAP1Q96SZ6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 AC139530.1-201ENST00000575312 1977 ntBASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 AC127496.7-201ENST00000625110 1798 ntBASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDK5RAP1Q96SZ6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CDK5RAP1Q96SZ6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDK5RAP1Q96SZ6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDK5RAP1Q96SZ6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms