Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCNX1Q96RV3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.14■□□□□ 0.66
PCNX1Q96RV3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.14■□□□□ 0.66
PCNX1Q96RV3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PCNX1Q96RV3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNX1Q96RV3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PCNX1Q96RV3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNX1Q96RV3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCNX1Q96RV3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 TSPY6P-201ENST00000448518 926 ntBASIC19.1■□□□□ 0.65
PCNX1Q96RV3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 AC013268.1-206ENST00000638368 961 ntBASIC19.1■□□□□ 0.65
PCNX1Q96RV3 AC112229.1-201ENST00000639295 961 ntBASIC19.1■□□□□ 0.65
PCNX1Q96RV3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNX1Q96RV3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 AC005181.1-201ENST00000604782 1256 ntBASIC19.09■□□□□ 0.65
PCNX1Q96RV3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.09■□□□□ 0.65
PCNX1Q96RV3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.09■□□□□ 0.65
PCNX1Q96RV3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
PCNX1Q96RV3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.08■□□□□ 0.65
PCNX1Q96RV3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
PCNX1Q96RV3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms