Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SNX18Q96RF0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX18Q96RF0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX18Q96RF0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX18Q96RF0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX18Q96RF0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX18Q96RF0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX18Q96RF0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 AC131281.2-201ENST00000520478 145 ntBASIC19.56■□□□□ 0.72
SNX18Q96RF0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 AL117332.1-201ENST00000622628 974 ntBASIC19.56■□□□□ 0.72
SNX18Q96RF0 AC241377.3-202ENST00000626088 1088 ntBASIC19.56■□□□□ 0.72
SNX18Q96RF0 AC241585.3-202ENST00000628937 1088 ntBASIC19.56■□□□□ 0.72
SNX18Q96RF0 AC245100.8-202ENST00000629247 1058 ntBASIC19.56■□□□□ 0.72
SNX18Q96RF0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX18Q96RF0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX18Q96RF0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX18Q96RF0 C11orf96-202ENST00000528572 1834 ntBASIC19.55■□□□□ 0.72
SNX18Q96RF0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 AC004687.1-201ENST00000579003 1625 ntBASIC19.55■□□□□ 0.72
SNX18Q96RF0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX18Q96RF0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SNX18Q96RF0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX18Q96RF0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SNX18Q96RF0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SNX18Q96RF0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX18Q96RF0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX18Q96RF0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNX18Q96RF0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX18Q96RF0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX18Q96RF0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX18Q96RF0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX18Q96RF0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX18Q96RF0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX18Q96RF0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX18Q96RF0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SNX18Q96RF0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX18Q96RF0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX18Q96RF0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 AL136116.3-201ENST00000402907 1138 ntBASIC19.53■□□□□ 0.72
SNX18Q96RF0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SNX18Q96RF0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX18Q96RF0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX18Q96RF0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.52■□□□□ 0.72
SNX18Q96RF0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX18Q96RF0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms