Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 OXCT2P1-201ENST00000447263 1535 ntBASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC46A1Q96NT5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 MFSD11-216ENST00000590393 1141 ntBASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 AL121832.2-201ENST00000610979 668 ntBASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC46A1Q96NT5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 AC083906.2-201ENST00000511578 360 ntBASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC46A1Q96NT5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC46A1Q96NT5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.7■□□□□ 0.91
SLC46A1Q96NT5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SLC46A1Q96NT5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 DUSP8P3-201ENST00000399571 1760 ntBASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC46A1Q96NT5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 AC231657.2-201ENST00000624556 255 ntBASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC46A1Q96NT5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 TSPY6P-201ENST00000448518 926 ntBASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 TSPY20P-201ENST00000450910 630 ntBASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 AL050303.2-201ENST00000619798 666 ntBASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC46A1Q96NT5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC46A1Q96NT5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms