Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 LINC01960-201ENST00000563759 1884 ntBASIC28.73■■■□□ 2.19
NBPF4Q96M43 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.73■■■□□ 2.19
NBPF4Q96M43 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC28.73■■■□□ 2.19
NBPF4Q96M43 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
NBPF4Q96M43 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
NBPF4Q96M43 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.72■■■□□ 2.19
NBPF4Q96M43 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.72■■■□□ 2.19
NBPF4Q96M43 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
NBPF4Q96M43 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
NBPF4Q96M43 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NBPF4Q96M43 GUSBP6-202ENST00000438529 1198 ntBASIC28.72■■■□□ 2.19
NBPF4Q96M43 AC083906.2-201ENST00000511578 360 ntBASIC28.72■■■□□ 2.19
NBPF4Q96M43 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC28.72■■■□□ 2.19
NBPF4Q96M43 AC142086.2-201ENST00000569753 217 ntBASIC28.72■■■□□ 2.19
NBPF4Q96M43 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC28.72■■■□□ 2.19
NBPF4Q96M43 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
NBPF4Q96M43 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
NBPF4Q96M43 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
NBPF4Q96M43 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.71■■■□□ 2.19
NBPF4Q96M43 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
NBPF4Q96M43 SERP1-208ENST00000491660 830 ntTSL 2 BASIC28.71■■■□□ 2.19
NBPF4Q96M43 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
NBPF4Q96M43 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
NBPF4Q96M43 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
NBPF4Q96M43 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
NBPF4Q96M43 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.7■■■□□ 2.19
NBPF4Q96M43 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
NBPF4Q96M43 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
NBPF4Q96M43 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
NBPF4Q96M43 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
NBPF4Q96M43 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC28.7■■■□□ 2.18
NBPF4Q96M43 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.7■■■□□ 2.18
NBPF4Q96M43 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
NBPF4Q96M43 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
NBPF4Q96M43 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.7■■■□□ 2.18
NBPF4Q96M43 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
NBPF4Q96M43 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
NBPF4Q96M43 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
NBPF4Q96M43 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
NBPF4Q96M43 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
NBPF4Q96M43 TSPY6P-201ENST00000448518 926 ntBASIC28.69■■■□□ 2.18
NBPF4Q96M43 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
NBPF4Q96M43 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
NBPF4Q96M43 SLC7A5P2-201ENST00000553010 536 ntBASIC28.69■■■□□ 2.18
NBPF4Q96M43 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.69■■■□□ 2.18
NBPF4Q96M43 AL121832.2-201ENST00000610979 668 ntBASIC28.69■■■□□ 2.18
NBPF4Q96M43 AC231657.2-201ENST00000624556 255 ntBASIC28.69■■■□□ 2.18
NBPF4Q96M43 MYCNOS-205ENST00000641950 531 ntBASIC28.69■■■□□ 2.18
NBPF4Q96M43 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
NBPF4Q96M43 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
NBPF4Q96M43 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.69■■■□□ 2.18
NBPF4Q96M43 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.68■■■□□ 2.18
NBPF4Q96M43 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
NBPF4Q96M43 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
NBPF4Q96M43 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.68■■■□□ 2.18
NBPF4Q96M43 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.68■■■□□ 2.18
NBPF4Q96M43 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.68■■■□□ 2.18
NBPF4Q96M43 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
NBPF4Q96M43 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.67■■■□□ 2.18
NBPF4Q96M43 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.67■■■□□ 2.18
NBPF4Q96M43 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.67■■■□□ 2.18
NBPF4Q96M43 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
NBPF4Q96M43 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
NBPF4Q96M43 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
NBPF4Q96M43 AC007322.1-201ENST00000426983 750 ntBASIC28.66■■■□□ 2.18
NBPF4Q96M43 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
NBPF4Q96M43 AC005181.1-201ENST00000604782 1256 ntBASIC28.66■■■□□ 2.18
NBPF4Q96M43 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.66■■■□□ 2.18
NBPF4Q96M43 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.66■■■□□ 2.18
NBPF4Q96M43 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.66■■■□□ 2.18
NBPF4Q96M43 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
NBPF4Q96M43 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 CNN2P6-201ENST00000439038 900 ntBASIC28.65■■■□□ 2.18
NBPF4Q96M43 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
NBPF4Q96M43 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
NBPF4Q96M43 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
NBPF4Q96M43 AP004607.7-201ENST00000527152 1677 ntBASIC28.64■■■□□ 2.18
NBPF4Q96M43 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.64■■■□□ 2.18
NBPF4Q96M43 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NBPF4Q96M43 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.64■■■□□ 2.18
NBPF4Q96M43 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
NBPF4Q96M43 LINC00526-201ENST00000581067 1875 ntBASIC28.63■■■□□ 2.17
NBPF4Q96M43 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
NBPF4Q96M43 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.63■■■□□ 2.17
NBPF4Q96M43 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.63■■■□□ 2.17
NBPF4Q96M43 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.63■■■□□ 2.17
NBPF4Q96M43 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC28.63■■■□□ 2.17
NBPF4Q96M43 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC28.63■■■□□ 2.17
NBPF4Q96M43 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.63■■■□□ 2.17
NBPF4Q96M43 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
NBPF4Q96M43 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
NBPF4Q96M43 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms