Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2FQ969M7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 RARRES2P1-201ENST00000474487 481 ntBASIC19.68■□□□□ 0.74
UBE2FQ969M7 AC010980.1-201ENST00000587192 1142 ntBASIC19.68■□□□□ 0.74
UBE2FQ969M7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE2FQ969M7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 AC026471.6-201ENST00000622954 1905 ntBASIC19.68■□□□□ 0.74
UBE2FQ969M7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2FQ969M7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2FQ969M7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2FQ969M7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE2FQ969M7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBE2FQ969M7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UBE2FQ969M7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2FQ969M7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
UBE2FQ969M7 LINC01521-201ENST00000504184 1943 ntBASIC19.66■□□□□ 0.74
UBE2FQ969M7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UBE2FQ969M7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE2FQ969M7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2FQ969M7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
UBE2FQ969M7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2FQ969M7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE2FQ969M7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2FQ969M7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE2FQ969M7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2FQ969M7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2FQ969M7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2FQ969M7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2FQ969M7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 AL121603.2-201ENST00000557373 2117 ntBASIC19.65■□□□□ 0.74
UBE2FQ969M7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2FQ969M7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2FQ969M7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2FQ969M7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2FQ969M7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBE2FQ969M7 LINC01006-201ENST00000333319 2292 ntBASIC19.64■□□□□ 0.74
UBE2FQ969M7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBE2FQ969M7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBE2FQ969M7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2FQ969M7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBE2FQ969M7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.63■□□□□ 0.73
UBE2FQ969M7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UBE2FQ969M7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.63■□□□□ 0.73
UBE2FQ969M7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBE2FQ969M7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBE2FQ969M7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2FQ969M7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.63■□□□□ 0.73
UBE2FQ969M7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
UBE2FQ969M7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE2FQ969M7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBE2FQ969M7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBE2FQ969M7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBE2FQ969M7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms