Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 DUX4L4-201ENST00000566884 1269 ntBASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.76■□□□□ 0.75
TRUB1Q8WWH5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 DUX4L18-201ENST00000553347 1267 ntBASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRUB1Q8WWH5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 BHLHE23-202ENST00000612929 1109 ntBASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRUB1Q8WWH5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRUB1Q8WWH5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.72■□□□□ 0.75
TRUB1Q8WWH5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRUB1Q8WWH5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 AC005703.6-201ENST00000623265 1329 ntBASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TRUB1Q8WWH5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 PVT1_1.1-201ENST00000615125 194 ntBASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms