Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 AC079089.2-201ENST00000531211 1277 ntBASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 SLC25A24-204ENST00000569674 2357 ntBASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4Y2Q8TD47 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4Y2Q8TD47 AF106564.1-201ENST00000607058 2553 ntBASIC18.89■□□□□ 0.62
RPS4Y2Q8TD47 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPS4Y2Q8TD47 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.89■□□□□ 0.62
RPS4Y2Q8TD47 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RPS4Y2Q8TD47 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPS4Y2Q8TD47 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 KRT125P-201ENST00000546827 989 ntBASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 Z92544.1-202ENST00000571933 1220 ntBASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 AC026471.6-201ENST00000622954 1905 ntBASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4Y2Q8TD47 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4Y2Q8TD47 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 AC073130.3-201ENST00000624389 2278 ntBASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4Y2Q8TD47 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RPS4Y2Q8TD47 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms