Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 BX842568.3-201ENST00000418104 571 ntBASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDH19Q8TAB3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 AC142381.2-201ENST00000566120 298 ntBASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH19Q8TAB3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 OR7E47P-201ENST00000546390 1422 ntBASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 FBXW4P1-201ENST00000426721 2239 ntBASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 FAM99A-202ENST00000538190 1989 ntBASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH19Q8TAB3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH19Q8TAB3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH19Q8TAB3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PCDH19Q8TAB3 AL031432.3-201ENST00000607698 485 ntBASIC22.33■■□□□ 1.17
PCDH19Q8TAB3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
PCDH19Q8TAB3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH19Q8TAB3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDH19Q8TAB3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PCDH19Q8TAB3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH19Q8TAB3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 AC010542.4-201ENST00000563151 1910 ntBASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 AC233992.3-201ENST00000607491 485 ntBASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH19Q8TAB3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH19Q8TAB3 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH19Q8TAB3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 EDA-201ENST00000338901 1233 ntBASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 CLDN5-201ENST00000403084 2357 ntBASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH19Q8TAB3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms