Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RFWD2Q8NHY2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFWD2Q8NHY2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.33■■□□□ 1
RFWD2Q8NHY2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.32■■□□□ 1
RFWD2Q8NHY2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RFWD2Q8NHY2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.32■■□□□ 1
RFWD2Q8NHY2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.32■■□□□ 1
RFWD2Q8NHY2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFWD2Q8NHY2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.31■■□□□ 1
RFWD2Q8NHY2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.31■■□□□ 1
RFWD2Q8NHY2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
RFWD2Q8NHY2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.31■■□□□ 1
RFWD2Q8NHY2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.31■■□□□ 1
RFWD2Q8NHY2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.31■■□□□ 1
RFWD2Q8NHY2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFWD2Q8NHY2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RFWD2Q8NHY2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD2Q8NHY2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD2Q8NHY2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD2Q8NHY2 LINC01521-201ENST00000504184 1943 ntBASIC21.3■■□□□ 1
RFWD2Q8NHY2 KRT18P24-201ENST00000344739 1156 ntBASIC21.3■■□□□ 1
RFWD2Q8NHY2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.3■■□□□ 1
RFWD2Q8NHY2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.3■■□□□ 1
RFWD2Q8NHY2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD2Q8NHY2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD2Q8NHY2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RFWD2Q8NHY2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFWD2Q8NHY2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFWD2Q8NHY2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD2Q8NHY2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD2Q8NHY2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD2Q8NHY2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 CA15P2-201ENST00000611168 834 ntBASIC21.29■■□□□ 1
RFWD2Q8NHY2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFWD2Q8NHY2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RFWD2Q8NHY2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 FP325331.1-202ENST00000623531 1380 ntBASIC21.28■■□□□ 1
RFWD2Q8NHY2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
RFWD2Q8NHY2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
RFWD2Q8NHY2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
RFWD2Q8NHY2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RFWD2Q8NHY2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.28■■□□□ 1
RFWD2Q8NHY2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.28■■□□□ 1
RFWD2Q8NHY2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RFWD2Q8NHY2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFWD2Q8NHY2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.27■■□□□ 1
RFWD2Q8NHY2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
RFWD2Q8NHY2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RFWD2Q8NHY2 YBX1P4-201ENST00000392794 808 ntBASIC21.27■■□□□ 1
RFWD2Q8NHY2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RFWD2Q8NHY2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFWD2Q8NHY2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RFWD2Q8NHY2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RFWD2Q8NHY2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.26■□□□□ 0.99
RFWD2Q8NHY2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.26■□□□□ 0.99
RFWD2Q8NHY2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.26■□□□□ 0.99
RFWD2Q8NHY2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD2Q8NHY2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD2Q8NHY2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms