Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 AC016769.1-201ENST00000409132 1010 ntBASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 AC009237.3-201ENST00000393279 1427 ntBASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 C9orf163-202ENST00000624034 2573 ntBASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
TTC9BQ8N6N2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 AC080038.1-201ENST00000611274 1154 ntBASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 AC055733.4-201ENST00000638462 1354 ntBASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 AP004607.7-201ENST00000527152 1677 ntBASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 AC137767.1-201ENST00000602918 1920 ntBASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 KRT19P1-201ENST00000405746 1186 ntBASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 ESRRAP2-201ENST00000418437 1549 ntBASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AC104187.1-201ENST00000607510 612 ntBASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 OR7E47P-201ENST00000546390 1422 ntBASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 RAP2CP1-201ENST00000605103 478 ntBASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 AC073111.5-205ENST00000641717 521 ntBASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 KRT87P-202ENST00000534226 1464 ntBASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 CDCA4P2-201ENST00000441182 718 ntBASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms