Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 AC016769.1-201ENST00000409132 1010 ntBASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 AC009237.3-201ENST00000393279 1427 ntBASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TTC9BQ8N6N2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 C9orf163-202ENST00000624034 2573 ntBASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TTC9BQ8N6N2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
TTC9BQ8N6N2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 AC080038.1-201ENST00000611274 1154 ntBASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 AC055733.4-201ENST00000638462 1354 ntBASIC22.76■■□□□ 1.23
TTC9BQ8N6N2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 AP004607.7-201ENST00000527152 1677 ntBASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 AC137767.1-201ENST00000602918 1920 ntBASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 KRT19P1-201ENST00000405746 1186 ntBASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TTC9BQ8N6N2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 ESRRAP2-201ENST00000418437 1549 ntBASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AC104187.1-201ENST00000607510 612 ntBASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 OR7E47P-201ENST00000546390 1422 ntBASIC22.74■■□□□ 1.23
TTC9BQ8N6N2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 RAP2CP1-201ENST00000605103 478 ntBASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 AC073111.5-205ENST00000641717 521 ntBASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 KRT87P-202ENST00000534226 1464 ntBASIC22.73■■□□□ 1.23
TTC9BQ8N6N2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TTC9BQ8N6N2 CDCA4P2-201ENST00000441182 718 ntBASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms