Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00311Q8N616 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00311Q8N616 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00311Q8N616 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00311Q8N616 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 AC091305.1-201ENST00000479476 895 ntBASIC17.57■□□□□ 0.4
LINC00311Q8N616 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.57■□□□□ 0.4
LINC00311Q8N616 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC00311Q8N616 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00311Q8N616 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LINC00311Q8N616 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00311Q8N616 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00311Q8N616 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00311Q8N616 AF213884.3-201ENST00000563833 479 ntBASIC17.56■□□□□ 0.4
LINC00311Q8N616 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.56■□□□□ 0.4
LINC00311Q8N616 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00311Q8N616 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00311Q8N616 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00311Q8N616 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00311Q8N616 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00311Q8N616 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.55■□□□□ 0.4
LINC00311Q8N616 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 AL136967.2-201ENST00000623968 743 ntBASIC17.55■□□□□ 0.4
LINC00311Q8N616 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00311Q8N616 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00311Q8N616 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC00311Q8N616 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 FAM99A-202ENST00000538190 1989 ntBASIC17.54■□□□□ 0.4
LINC00311Q8N616 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 SUDS3P1-201ENST00000505831 966 ntBASIC17.54■□□□□ 0.4
LINC00311Q8N616 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 SMUG1P1-201ENST00000590640 811 ntBASIC17.54■□□□□ 0.4
LINC00311Q8N616 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
LINC00311Q8N616 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00311Q8N616 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.53■□□□□ 0.4
LINC00311Q8N616 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.53■□□□□ 0.4
LINC00311Q8N616 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00311Q8N616 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00311Q8N616 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00311Q8N616 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00311Q8N616 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00311Q8N616 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00311Q8N616 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.53■□□□□ 0.4
LINC00311Q8N616 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.53■□□□□ 0.4
LINC00311Q8N616 LINC00565-201ENST00000562710 2331 ntBASIC17.53■□□□□ 0.4
LINC00311Q8N616 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00311Q8N616 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00311Q8N616 TSPY26P-201ENST00000476365 1326 ntBASIC17.52■□□□□ 0.4
LINC00311Q8N616 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00311Q8N616 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.52■□□□□ 0.4
LINC00311Q8N616 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
LINC00311Q8N616 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
LINC00311Q8N616 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.52■□□□□ 0.4
LINC00311Q8N616 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms