Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CARFQ8N187 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CARFQ8N187 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.59■□□□□ 0.89
CARFQ8N187 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CARFQ8N187 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CARFQ8N187 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CARFQ8N187 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.58■□□□□ 0.89
CARFQ8N187 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.58■□□□□ 0.89
CARFQ8N187 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.58■□□□□ 0.89
CARFQ8N187 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CARFQ8N187 RARRES2P11-201ENST00000635158 484 ntBASIC20.58■□□□□ 0.89
CARFQ8N187 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CARFQ8N187 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CARFQ8N187 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CARFQ8N187 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CARFQ8N187 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.57■□□□□ 0.88
CARFQ8N187 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.57■□□□□ 0.88
CARFQ8N187 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CARFQ8N187 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.57■□□□□ 0.88
CARFQ8N187 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.57■□□□□ 0.88
CARFQ8N187 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.57■□□□□ 0.88
CARFQ8N187 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.57■□□□□ 0.88
CARFQ8N187 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.57■□□□□ 0.88
CARFQ8N187 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.57■□□□□ 0.88
CARFQ8N187 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CARFQ8N187 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.56■□□□□ 0.88
CARFQ8N187 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.56■□□□□ 0.88
CARFQ8N187 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.56■□□□□ 0.88
CARFQ8N187 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.56■□□□□ 0.88
CARFQ8N187 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CARFQ8N187 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
CARFQ8N187 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.55■□□□□ 0.88
CARFQ8N187 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.55■□□□□ 0.88
CARFQ8N187 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.55■□□□□ 0.88
CARFQ8N187 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CARFQ8N187 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CARFQ8N187 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CARFQ8N187 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.54■□□□□ 0.88
CARFQ8N187 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CARFQ8N187 AP006587.3-201ENST00000525742 1516 ntBASIC20.54■□□□□ 0.88
CARFQ8N187 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CARFQ8N187 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CARFQ8N187 AC004911.1-201ENST00000416316 871 ntBASIC20.54■□□□□ 0.88
CARFQ8N187 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CARFQ8N187 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.54■□□□□ 0.88
CARFQ8N187 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.54■□□□□ 0.88
CARFQ8N187 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.54■□□□□ 0.88
CARFQ8N187 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.54■□□□□ 0.88
CARFQ8N187 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CARFQ8N187 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CARFQ8N187 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CARFQ8N187 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.54■□□□□ 0.88
CARFQ8N187 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CARFQ8N187 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARFQ8N187 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARFQ8N187 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARFQ8N187 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CARFQ8N187 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.53■□□□□ 0.88
CARFQ8N187 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.53■□□□□ 0.88
CARFQ8N187 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CARFQ8N187 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CARFQ8N187 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARFQ8N187 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARFQ8N187 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.52■□□□□ 0.88
CARFQ8N187 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CARFQ8N187 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 AC104187.1-201ENST00000607510 612 ntBASIC20.52■□□□□ 0.88
CARFQ8N187 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARFQ8N187 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CARFQ8N187 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms