Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC32.52■■■□□ 2.8
ABCA6Q8N139 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC32.52■■■□□ 2.8
ABCA6Q8N139 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC32.52■■■□□ 2.8
ABCA6Q8N139 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ABCA6Q8N139 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ABCA6Q8N139 MIR4758-201ENST00000577688 71 ntBASIC32.51■■■□□ 2.8
ABCA6Q8N139 AC092118.2-201ENST00000613495 667 ntBASIC32.51■■■□□ 2.8
ABCA6Q8N139 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC32.51■■■□□ 2.8
ABCA6Q8N139 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
ABCA6Q8N139 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
ABCA6Q8N139 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC32.51■■■□□ 2.79
ABCA6Q8N139 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC32.51■■■□□ 2.79
ABCA6Q8N139 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
ABCA6Q8N139 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
ABCA6Q8N139 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.5■■■□□ 2.79
ABCA6Q8N139 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC32.5■■■□□ 2.79
ABCA6Q8N139 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
ABCA6Q8N139 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
ABCA6Q8N139 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC32.49■■■□□ 2.79
ABCA6Q8N139 AC093787.1-201ENST00000450396 207 ntBASIC32.49■■■□□ 2.79
ABCA6Q8N139 MYC-209ENST00000641252 345 ntBASIC32.49■■■□□ 2.79
ABCA6Q8N139 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
ABCA6Q8N139 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
ABCA6Q8N139 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
ABCA6Q8N139 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
ABCA6Q8N139 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 PLLP-204ENST00000569059 665 ntTSL 3 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
ABCA6Q8N139 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
ABCA6Q8N139 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 ADM-205ENST00000528544 586 ntTSL 2 BASIC32.48■■■□□ 2.79
ABCA6Q8N139 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
ABCA6Q8N139 AC142381.3-201ENST00000568208 1670 ntBASIC32.47■■■□□ 2.79
ABCA6Q8N139 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
ABCA6Q8N139 DUSP5P2-201ENST00000426873 1033 ntBASIC32.47■■■□□ 2.79
ABCA6Q8N139 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
ABCA6Q8N139 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
ABCA6Q8N139 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
ABCA6Q8N139 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC32.46■■■□□ 2.79
ABCA6Q8N139 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
ABCA6Q8N139 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
ABCA6Q8N139 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
ABCA6Q8N139 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
ABCA6Q8N139 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC32.46■■■□□ 2.79
ABCA6Q8N139 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC32.46■■■□□ 2.79
ABCA6Q8N139 AC016405.3-201ENST00000607710 860 ntBASIC32.46■■■□□ 2.79
ABCA6Q8N139 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
ABCA6Q8N139 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC32.46■■■□□ 2.79
ABCA6Q8N139 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC32.46■■■□□ 2.79
ABCA6Q8N139 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ABCA6Q8N139 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC32.44■■■□□ 2.78
ABCA6Q8N139 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
ABCA6Q8N139 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC32.43■■■□□ 2.78
ABCA6Q8N139 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ABCA6Q8N139 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC32.43■■■□□ 2.78
ABCA6Q8N139 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ABCA6Q8N139 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
ABCA6Q8N139 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC32.42■■■□□ 2.78
ABCA6Q8N139 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC32.42■■■□□ 2.78
ABCA6Q8N139 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
ABCA6Q8N139 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
ABCA6Q8N139 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.41■■■□□ 2.78
ABCA6Q8N139 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ABCA6Q8N139 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC32.41■■■□□ 2.78
ABCA6Q8N139 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.41■■■□□ 2.78
ABCA6Q8N139 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
ABCA6Q8N139 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA6Q8N139 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA6Q8N139 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC32.4■■■□□ 2.78
ABCA6Q8N139 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA6Q8N139 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA6Q8N139 NAA20-201ENST00000310450 920 ntTSL 2 BASIC32.4■■■□□ 2.78
ABCA6Q8N139 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ABCA6Q8N139 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.4■■■□□ 2.78
ABCA6Q8N139 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC32.4■■■□□ 2.78
ABCA6Q8N139 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC32.4■■■□□ 2.78
ABCA6Q8N139 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC32.4■■■□□ 2.78
ABCA6Q8N139 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.4■■■□□ 2.78
ABCA6Q8N139 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC32.39■■■□□ 2.78
ABCA6Q8N139 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.39■■■□□ 2.78
ABCA6Q8N139 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
ABCA6Q8N139 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC32.39■■■□□ 2.78
ABCA6Q8N139 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
ABCA6Q8N139 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC32.39■■■□□ 2.78
ABCA6Q8N139 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
ABCA6Q8N139 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
ABCA6Q8N139 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
ABCA6Q8N139 OR10C1-204ENST00000622521 1039 ntBASIC32.38■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms