Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 AC099791.1-201ENST00000416440 715 ntBASIC24■■□□□ 1.43
CCDC65Q8IXS2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CCDC65Q8IXS2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
CCDC65Q8IXS2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC65Q8IXS2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 AP001330.3-201ENST00000520123 633 ntBASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC65Q8IXS2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 LINC00565-201ENST00000562710 2331 ntBASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 AC133561.4-201ENST00000566112 224 ntBASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC65Q8IXS2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 IGHV3-19-201ENST00000521488 291 ntBASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CCDC65Q8IXS2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 AF213884.3-201ENST00000563833 479 ntBASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC65Q8IXS2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCDC65Q8IXS2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 AL031432.3-201ENST00000607698 485 ntBASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CCDC65Q8IXS2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 MIR939-201ENST00000401314 82 ntBASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC65Q8IXS2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms