Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NPAS4Q8IUM7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NPAS4Q8IUM7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 SLC7A5P2-201ENST00000553010 536 ntBASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 DUSP8P5-201ENST00000422884 1815 ntBASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NPAS4Q8IUM7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 CD99P1-205ENST00000527459 561 ntBASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPAS4Q8IUM7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 LINC01960-201ENST00000563759 1884 ntBASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 GUSBP6-202ENST00000438529 1198 ntBASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
NPAS4Q8IUM7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NPAS4Q8IUM7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 AC010141.2-201ENST00000452426 721 ntBASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.32■■□□□ 1.32
NPAS4Q8IUM7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPAS4Q8IUM7 AC138907.5-202ENST00000569484 235 ntBASIC23.31■■□□□ 1.32
NPAS4Q8IUM7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.31■■□□□ 1.32
NPAS4Q8IUM7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPAS4Q8IUM7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPAS4Q8IUM7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.31■■□□□ 1.32
NPAS4Q8IUM7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 AP004607.7-201ENST00000527152 1677 ntBASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 KRT18P20-201ENST00000548986 1279 ntBASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.3■■□□□ 1.32
NPAS4Q8IUM7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 SLC29A4P1-201ENST00000398760 971 ntBASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 TMEM191A-211ENST00000637163 1067 ntBASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NPAS4Q8IUM7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 CNN2P6-201ENST00000439038 900 ntBASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NPAS4Q8IUM7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPAS4Q8IUM7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms