Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC28Q86X40 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
LRRC28Q86X40 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC28Q86X40 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LRRC28Q86X40 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.14■□□□□ 0.66
LRRC28Q86X40 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LRRC28Q86X40 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRC28Q86X40 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC28Q86X40 AC131281.2-201ENST00000520478 145 ntBASIC19.14■□□□□ 0.65
LRRC28Q86X40 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC28Q86X40 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRC28Q86X40 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRC28Q86X40 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRRC28Q86X40 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC28Q86X40 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC28Q86X40 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC28Q86X40 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LRRC28Q86X40 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC28Q86X40 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC28Q86X40 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LRRC28Q86X40 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC28Q86X40 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC28Q86X40 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC28Q86X40 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LRRC28Q86X40 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC28Q86X40 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC28Q86X40 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC28Q86X40 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC28Q86X40 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRRC28Q86X40 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC28Q86X40 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC28Q86X40 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC28Q86X40 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 AC244015.2-201ENST00000616358 1861 ntBASIC19.11■□□□□ 0.65
LRRC28Q86X40 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRRC28Q86X40 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC28Q86X40 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC28Q86X40 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRRC28Q86X40 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC28Q86X40 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 AL512631.2-201ENST00000604634 923 ntBASIC19.1■□□□□ 0.65
LRRC28Q86X40 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 AC092667.1-201ENST00000434301 2586 ntBASIC19.1■□□□□ 0.65
LRRC28Q86X40 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC28Q86X40 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
LRRC28Q86X40 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRRC28Q86X40 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LRRC28Q86X40 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 MIR4466-201ENST00000606121 54 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms