Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PBX2P1-201ENST00000493219 1291 ntBASIC21.58■■□□□ 1.05
LDB1Q86U70 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LDB1Q86U70 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
LDB1Q86U70 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.58■■□□□ 1.04
LDB1Q86U70 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.58■■□□□ 1.04
LDB1Q86U70 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
LDB1Q86U70 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LDB1Q86U70 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
LDB1Q86U70 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.57■■□□□ 1.04
LDB1Q86U70 AC110285.6-201ENST00000617652 491 ntBASIC21.57■■□□□ 1.04
LDB1Q86U70 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LDB1Q86U70 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LDB1Q86U70 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LDB1Q86U70 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LDB1Q86U70 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LDB1Q86U70 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LDB1Q86U70 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LDB1Q86U70 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LDB1Q86U70 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LDB1Q86U70 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LDB1Q86U70 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
LDB1Q86U70 AC010141.3-201ENST00000456659 717 ntBASIC21.56■■□□□ 1.04
LDB1Q86U70 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.56■■□□□ 1.04
LDB1Q86U70 AC068587.7-201ENST00000641602 218 ntBASIC21.56■■□□□ 1.04
LDB1Q86U70 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LDB1Q86U70 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LDB1Q86U70 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.56■■□□□ 1.04
LDB1Q86U70 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LDB1Q86U70 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LDB1Q86U70 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LDB1Q86U70 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.56■■□□□ 1.04
LDB1Q86U70 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.56■■□□□ 1.04
LDB1Q86U70 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.55■■□□□ 1.04
LDB1Q86U70 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.55■■□□□ 1.04
LDB1Q86U70 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LDB1Q86U70 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.55■■□□□ 1.04
LDB1Q86U70 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.55■■□□□ 1.04
LDB1Q86U70 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.55■■□□□ 1.04
LDB1Q86U70 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.55■■□□□ 1.04
LDB1Q86U70 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.55■■□□□ 1.04
LDB1Q86U70 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LDB1Q86U70 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LDB1Q86U70 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LDB1Q86U70 CLDN5-201ENST00000403084 2357 ntBASIC21.54■■□□□ 1.04
LDB1Q86U70 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LDB1Q86U70 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LDB1Q86U70 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.54■■□□□ 1.04
LDB1Q86U70 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LDB1Q86U70 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.54■■□□□ 1.04
LDB1Q86U70 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LDB1Q86U70 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.54■■□□□ 1.04
LDB1Q86U70 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.54■■□□□ 1.04
LDB1Q86U70 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
LDB1Q86U70 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
LDB1Q86U70 FAM99A-202ENST00000538190 1989 ntBASIC21.54■■□□□ 1.04
LDB1Q86U70 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LDB1Q86U70 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LDB1Q86U70 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.53■■□□□ 1.04
LDB1Q86U70 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.53■■□□□ 1.04
LDB1Q86U70 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LDB1Q86U70 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LDB1Q86U70 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LDB1Q86U70 BX842568.3-201ENST00000418104 571 ntBASIC21.53■■□□□ 1.04
LDB1Q86U70 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.53■■□□□ 1.04
LDB1Q86U70 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.53■■□□□ 1.04
LDB1Q86U70 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.53■■□□□ 1.04
LDB1Q86U70 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.53■■□□□ 1.04
LDB1Q86U70 AC008764.7-201ENST00000593779 1081 ntBASIC21.53■■□□□ 1.04
LDB1Q86U70 AC087239.1-201ENST00000622671 572 ntBASIC21.53■■□□□ 1.04
LDB1Q86U70 OR7E47P-201ENST00000546390 1422 ntBASIC21.53■■□□□ 1.04
LDB1Q86U70 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LDB1Q86U70 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LDB1Q86U70 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
LDB1Q86U70 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.52■■□□□ 1.04
LDB1Q86U70 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LDB1Q86U70 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LDB1Q86U70 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LDB1Q86U70 OXCT2P1-201ENST00000447263 1535 ntBASIC21.52■■□□□ 1.04
LDB1Q86U70 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LDB1Q86U70 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.52■■□□□ 1.04
LDB1Q86U70 AC106739.1-201ENST00000617035 715 ntBASIC21.52■■□□□ 1.04
LDB1Q86U70 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.52■■□□□ 1.04
LDB1Q86U70 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LDB1Q86U70 AC010542.4-201ENST00000563151 1910 ntBASIC21.52■■□□□ 1.04
LDB1Q86U70 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LDB1Q86U70 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.52■■□□□ 1.04
LDB1Q86U70 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LDB1Q86U70 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.52■■□□□ 1.03
LDB1Q86U70 AC026471.6-201ENST00000622954 1905 ntBASIC21.51■■□□□ 1.03
LDB1Q86U70 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LDB1Q86U70 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LDB1Q86U70 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.51■■□□□ 1.03
LDB1Q86U70 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms