Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD3Q7Z3D4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LYSMD3Q7Z3D4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.7■■□□□ 1.07
LYSMD3Q7Z3D4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LYSMD3Q7Z3D4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD3Q7Z3D4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD3Q7Z3D4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.7■■□□□ 1.06
LYSMD3Q7Z3D4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD3Q7Z3D4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.7■■□□□ 1.06
LYSMD3Q7Z3D4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 IRS3P-201ENST00000223076 1006 ntBASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 SMUG1P1-201ENST00000590640 811 ntBASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 AC105233.4-201ENST00000642045 216 ntBASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 AC242852.2-201ENST00000615738 1807 ntBASIC21.69■■□□□ 1.06
LYSMD3Q7Z3D4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 OR7E47P-201ENST00000546390 1422 ntBASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 AL117328.2-201ENST00000624617 1940 ntBASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD3Q7Z3D4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.67■■□□□ 1.06
LYSMD3Q7Z3D4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LYSMD3Q7Z3D4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LYSMD3Q7Z3D4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LYSMD3Q7Z3D4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms