Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ECEL1P1-201ENST00000373592 1742 ntBASIC20.16■□□□□ 0.82
RTL4Q6ZR62 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 LINC00526-201ENST00000581067 1875 ntBASIC20.16■□□□□ 0.82
RTL4Q6ZR62 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 AC087239.1-201ENST00000622671 572 ntBASIC20.15■□□□□ 0.82
RTL4Q6ZR62 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTL4Q6ZR62 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
RTL4Q6ZR62 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 AC026271.2-201ENST00000428091 497 ntBASIC20.14■□□□□ 0.81
RTL4Q6ZR62 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 AL358852.1-201ENST00000623174 1268 ntBASIC20.14■□□□□ 0.81
RTL4Q6ZR62 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.14■□□□□ 0.81
RTL4Q6ZR62 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RTL4Q6ZR62 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 AC242852.2-201ENST00000615738 1807 ntBASIC20.12■□□□□ 0.81
RTL4Q6ZR62 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 AL354811.1-201ENST00000610286 706 ntBASIC20.12■□□□□ 0.81
RTL4Q6ZR62 AL031602.1-201ENST00000633169 911 ntBASIC20.12■□□□□ 0.81
RTL4Q6ZR62 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL4Q6ZR62 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 AL024507.2-201ENST00000606070 2574 ntBASIC20.11■□□□□ 0.81
RTL4Q6ZR62 AC127496.7-201ENST00000625110 1798 ntBASIC20.11■□□□□ 0.81
RTL4Q6ZR62 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms