Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 MIR7108-201ENST00000614319 87 ntBASIC20.36■□□□□ 0.85
LPCAT4Q643R3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
LPCAT4Q643R3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LPCAT4Q643R3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
LPCAT4Q643R3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.33■□□□□ 0.85
LPCAT4Q643R3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LPCAT4Q643R3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.32■□□□□ 0.84
LPCAT4Q643R3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LPCAT4Q643R3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 AC087393.1-201ENST00000582896 145 ntBASIC20.3■□□□□ 0.84
LPCAT4Q643R3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.3■□□□□ 0.84
LPCAT4Q643R3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LPCAT4Q643R3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms