Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.92■■□□□ 1.1
FNDC3BQ53EP0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FNDC3BQ53EP0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 OR7E47P-201ENST00000546390 1422 ntBASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.91■■□□□ 1.1
FNDC3BQ53EP0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.9■■□□□ 1.1
FNDC3BQ53EP0 AP004607.7-201ENST00000527152 1677 ntBASIC21.89■■□□□ 1.1
FNDC3BQ53EP0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FNDC3BQ53EP0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FNDC3BQ53EP0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 AC080038.1-201ENST00000611274 1154 ntBASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 KRT87P-202ENST00000534226 1464 ntBASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
FNDC3BQ53EP0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FNDC3BQ53EP0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.87■■□□□ 1.09
FNDC3BQ53EP0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.86■■□□□ 1.09
FNDC3BQ53EP0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 AC104187.1-201ENST00000607510 612 ntBASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FNDC3BQ53EP0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 LINC00526-201ENST00000581067 1875 ntBASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.84■■□□□ 1.09
FNDC3BQ53EP0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms