Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF404Q494X3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF404Q494X3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ZNF404Q494X3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF404Q494X3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF404Q494X3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF404Q494X3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF404Q494X3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF404Q494X3 AC021242.3-201ENST00000607598 1377 ntBASIC19.49■□□□□ 0.71
ZNF404Q494X3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF404Q494X3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.49■□□□□ 0.71
ZNF404Q494X3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.49■□□□□ 0.71
ZNF404Q494X3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZNF404Q494X3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF404Q494X3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZNF404Q494X3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF404Q494X3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF404Q494X3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF404Q494X3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF404Q494X3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF404Q494X3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF404Q494X3 GUSBP5-201ENST00000418136 578 ntBASIC19.47■□□□□ 0.71
ZNF404Q494X3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF404Q494X3 MIR4787-201ENST00000607364 84 ntBASIC19.47■□□□□ 0.71
ZNF404Q494X3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF404Q494X3 AF131216.4-201ENST00000638924 1588 ntBASIC19.47■□□□□ 0.71
ZNF404Q494X3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF404Q494X3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF404Q494X3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.46■□□□□ 0.71
ZNF404Q494X3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.46■□□□□ 0.71
ZNF404Q494X3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF404Q494X3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF404Q494X3 AL353803.4-201ENST00000565882 1934 ntBASIC19.45■□□□□ 0.7
ZNF404Q494X3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF404Q494X3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF404Q494X3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF404Q494X3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF404Q494X3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF404Q494X3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF404Q494X3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ZNF404Q494X3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF404Q494X3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF404Q494X3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF404Q494X3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF404Q494X3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF404Q494X3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF404Q494X3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF404Q494X3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF404Q494X3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF404Q494X3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF404Q494X3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF404Q494X3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF404Q494X3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF404Q494X3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF404Q494X3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF404Q494X3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF404Q494X3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNF404Q494X3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZNF404Q494X3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF404Q494X3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF404Q494X3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF404Q494X3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF404Q494X3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF404Q494X3 AL391422.3-201ENST00000603791 2761 ntBASIC19.42■□□□□ 0.7
ZNF404Q494X3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF404Q494X3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
ZNF404Q494X3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms