Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 PEX12YMR026C 1200 nt2.78□□□□□ -1.96
HRD1Q08109 OCA2YNL056W 594 nt2.78□□□□□ -1.96
HRD1Q08109 CMD1YBR109C 444 nt2.78□□□□□ -1.96
HRD1Q08109 RPA135YPR010C 3612 nt2.78□□□□□ -1.96
HRD1Q08109 CCM1YGR150C 2595 nt2.78□□□□□ -1.96
HRD1Q08109 TRE2YOR256C 2430 nt2.78□□□□□ -1.97
HRD1Q08109 DNM1YLL001W 2274 nt2.77□□□□□ -1.97
HRD1Q08109 OAF3YKR064W 2592 nt2.77□□□□□ -1.97
HRD1Q08109 VPS33YLR396C 2076 nt2.77□□□□□ -1.97
HRD1Q08109 REC8YPR007C 2043 nt2.77□□□□□ -1.97
HRD1Q08109 DET1YDR051C 1005 nt2.77□□□□□ -1.97
HRD1Q08109 FRQ1YDR373W 573 nt2.77□□□□□ -1.97
HRD1Q08109 YIL025CYIL025C 375 nt2.77□□□□□ -1.97
HRD1Q08109 FMC1YIL098C 468 nt2.77□□□□□ -1.97
HRD1Q08109 YNL320WYNL320W 855 nt2.77□□□□□ -1.97
HRD1Q08109 DGA1YOR245C 1257 nt2.77□□□□□ -1.97
HRD1Q08109 MIC60YKR016W 1623 nt2.77□□□□□ -1.97
HRD1Q08109 YHR080CYHR080C 4038 nt2.77□□□□□ -1.97
HRD1Q08109 SRC1YML034W 2505 nt2.77□□□□□ -1.97
HRD1Q08109 SLH1YGR271W 5904 nt2.77□□□□□ -1.97
HRD1Q08109 NPL4YBR170C 1743 nt2.76□□□□□ -1.97
HRD1Q08109 GAS2YLR343W 1668 nt2.76□□□□□ -1.97
HRD1Q08109 SEC15YGL233W 2733 nt2.76□□□□□ -1.97
HRD1Q08109 STP1YDR463W 1560 nt2.76□□□□□ -1.97
HRD1Q08109 HIM1YDR317W 1245 nt2.76□□□□□ -1.97
HRD1Q08109 MTC3YGL226W 372 nt2.76□□□□□ -1.97
HRD1Q08109 RPL17AYKL180W 555 nt2.76□□□□□ -1.97
HRD1Q08109 ERG2YMR202W 669 nt2.76□□□□□ -1.97
HRD1Q08109 TMC1YOR052C 453 nt2.76□□□□□ -1.97
HRD1Q08109 BUD21YOR078W 645 nt2.76□□□□□ -1.97
HRD1Q08109 ISA2YPR067W 558 nt2.76□□□□□ -1.97
HRD1Q08109 EPO1YMR124W 2832 nt2.76□□□□□ -1.97
HRD1Q08109 DAP2YHR028C 2457 nt2.76□□□□□ -1.97
HRD1Q08109 PTM1YKL039W 1572 nt2.75□□□□□ -1.97
HRD1Q08109 RCR2YDR003W 633 nt2.75□□□□□ -1.97
HRD1Q08109 YDR391CYDR391C 699 nt2.75□□□□□ -1.97
HRD1Q08109 PSF3YOL146W 585 nt2.75□□□□□ -1.97
HRD1Q08109 YBR053CYBR053C 1077 nt2.75□□□□□ -1.97
HRD1Q08109 PRP8YHR165C 7242 nt2.75□□□□□ -1.97
HRD1Q08109 YGR117CYGR117C 1431 nt2.75□□□□□ -1.97
HRD1Q08109 YHR202WYHR202W 1809 nt2.75□□□□□ -1.97
HRD1Q08109 TIM21YGR033C 720 nt2.74□□□□□ -1.97
HRD1Q08109 JLP1YLL057C 1239 nt2.74□□□□□ -1.97
HRD1Q08109 SSU72YNL222W 621 nt2.74□□□□□ -1.97
HRD1Q08109 PEX11YOL147C 711 nt2.74□□□□□ -1.97
HRD1Q08109 ATG26YLR189C 3597 nt2.74□□□□□ -1.97
HRD1Q08109 TCM62YBR044C 1719 nt2.73□□□□□ -1.97
HRD1Q08109 SPB4YFL002C 1821 nt2.73□□□□□ -1.97
HRD1Q08109 YDL162CYDL162C 357 nt2.73□□□□□ -1.97
HRD1Q08109 YEL028WYEL028W 462 nt2.73□□□□□ -1.97
HRD1Q08109 VMA8YEL051W 771 nt2.73□□□□□ -1.97
HRD1Q08109 YGL214WYGL214W 486 nt2.73□□□□□ -1.97
HRD1Q08109 RPS23AYGR118W 438 nt2.73□□□□□ -1.97
HRD1Q08109 RPL22AYLR061W 366 nt2.73□□□□□ -1.97
HRD1Q08109 DCS1YLR270W 1053 nt2.73□□□□□ -1.97
HRD1Q08109 INN1YNL152W 1230 nt2.73□□□□□ -1.97
HRD1Q08109 RFC3YNL290W 1023 nt2.73□□□□□ -1.97
HRD1Q08109 RPS23BYPR132W 438 nt2.73□□□□□ -1.97
HRD1Q08109 CHK1YBR274W 1584 nt2.73□□□□□ -1.97
HRD1Q08109 RPA190YOR341W 4995 nt2.73□□□□□ -1.97
HRD1Q08109 TOM1YDR457W 9807 nt2.73□□□□□ -1.97
HRD1Q08109 PRR2YDL214C 2100 nt2.72□□□□□ -1.97
HRD1Q08109 TSC11YER093C 4293 nt2.72□□□□□ -1.97
HRD1Q08109 BMH2YDR099W 822 nt2.72□□□□□ -1.97
HRD1Q08109 YNL143CYNL143C 393 nt2.72□□□□□ -1.97
HRD1Q08109 SPO14YKR031C 5052 nt2.72□□□□□ -1.97
HRD1Q08109 SUP45YBR143C 1314 nt2.71□□□□□ -1.98
HRD1Q08109 ULP1YPL020C 1866 nt2.71□□□□□ -1.98
HRD1Q08109 AKR1YDR264C 2295 nt2.71□□□□□ -1.98
HRD1Q08109 FRE2YKL220C 2136 nt2.71□□□□□ -1.98
HRD1Q08109 YGR015CYGR015C 987 nt2.71□□□□□ -1.98
HRD1Q08109 PCD1YLR151C 1023 nt2.71□□□□□ -1.98
HRD1Q08109 GOT1YMR292W 417 nt2.71□□□□□ -1.98
HRD1Q08109 RAX2YLR084C 3663 nt2.71□□□□□ -1.98
HRD1Q08109 SIZ1YDR409W 2715 nt2.71□□□□□ -1.98
HRD1Q08109 PRM2YIL037C 1971 nt2.7□□□□□ -1.98
HRD1Q08109 RSN1YMR266W 2862 nt2.7□□□□□ -1.98
HRD1Q08109 CHO2YGR157W 2610 nt2.7□□□□□ -1.98
HRD1Q08109 BSC1YDL037C 987 nt2.7□□□□□ -1.98
HRD1Q08109 YDL176WYDL176W 2127 nt2.7□□□□□ -1.98
HRD1Q08109 tK(UUU)DtK(UUU)D 73 nt2.7□□□□□ -1.98
HRD1Q08109 tK(UUU)G1tK(UUU)G1 73 nt2.7□□□□□ -1.98
HRD1Q08109 tK(UUU)G2tK(UUU)G2 73 nt2.7□□□□□ -1.98
HRD1Q08109 tK(UUU)KtK(UUU)K 73 nt2.7□□□□□ -1.98
HRD1Q08109 tK(UUU)LtK(UUU)L 73 nt2.7□□□□□ -1.98
HRD1Q08109 tK(UUU)OtK(UUU)O 73 nt2.7□□□□□ -1.98
HRD1Q08109 tK(UUU)PtK(UUU)P 73 nt2.7□□□□□ -1.98
HRD1Q08109 YLR230WYLR230W 306 nt2.7□□□□□ -1.98
HRD1Q08109 YMR122W-AYMR122W-A 255 nt2.7□□□□□ -1.98
HRD1Q08109 SIL1YOL031C 1266 nt2.7□□□□□ -1.98
HRD1Q08109 SIR1YKR101W 1965 nt2.7□□□□□ -1.98
HRD1Q08109 DRS2YAL026C 4068 nt2.7□□□□□ -1.98
HRD1Q08109 ARP4YJL081C 1470 nt2.7□□□□□ -1.98
HRD1Q08109 RAD7YJR052W 1698 nt2.69□□□□□ -1.98
HRD1Q08109 KRE2YDR483W 1329 nt2.69□□□□□ -1.98
HRD1Q08109 PHO5YBR093C 1404 nt2.69□□□□□ -1.98
HRD1Q08109 MET10YFR030W 3108 nt2.69□□□□□ -1.98
HRD1Q08109 CLB3YDL155W 1284 nt2.69□□□□□ -1.98
HRD1Q08109 RMT2YDR465C 1239 nt2.69□□□□□ -1.98
HRD1Q08109 SCM4YGR049W 564 nt2.69□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms