Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
YBX1P67809 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YBX1P67809 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
YBX1P67809 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
YBX1P67809 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.11■□□□□ 0.97
YBX1P67809 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
YBX1P67809 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.11■□□□□ 0.97
YBX1P67809 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
YBX1P67809 CA15P2-201ENST00000611168 834 ntBASIC21.11■□□□□ 0.97
YBX1P67809 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YBX1P67809 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.11■□□□□ 0.97
YBX1P67809 AL024507.2-201ENST00000606070 2574 ntBASIC21.11■□□□□ 0.97
YBX1P67809 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YBX1P67809 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
YBX1P67809 C11orf96-202ENST00000528572 1834 ntBASIC21.11■□□□□ 0.97
YBX1P67809 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
YBX1P67809 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.1■□□□□ 0.97
YBX1P67809 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
YBX1P67809 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.1■□□□□ 0.97
YBX1P67809 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 AC027682.1-201ENST00000562846 899 ntBASIC21.1■□□□□ 0.97
YBX1P67809 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.1■□□□□ 0.97
YBX1P67809 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YBX1P67809 RASA4CP-201ENST00000424092 1398 ntBASIC21.1■□□□□ 0.97
YBX1P67809 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.09■□□□□ 0.97
YBX1P67809 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YBX1P67809 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
YBX1P67809 FBXW4P1-201ENST00000426721 2239 ntBASIC21.09■□□□□ 0.97
YBX1P67809 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
YBX1P67809 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
YBX1P67809 AC126544.1-201ENST00000580842 1059 ntBASIC21.09■□□□□ 0.97
YBX1P67809 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.09■□□□□ 0.97
YBX1P67809 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
YBX1P67809 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
YBX1P67809 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
YBX1P67809 AC092053.2-201ENST00000640557 1818 ntBASIC21.08■□□□□ 0.97
YBX1P67809 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
YBX1P67809 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YBX1P67809 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
YBX1P67809 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
YBX1P67809 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YBX1P67809 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.08■□□□□ 0.97
YBX1P67809 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
YBX1P67809 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YBX1P67809 AC091305.1-201ENST00000479476 895 ntBASIC21.08■□□□□ 0.97
YBX1P67809 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
YBX1P67809 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
YBX1P67809 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
YBX1P67809 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
YBX1P67809 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.07■□□□□ 0.96
YBX1P67809 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
YBX1P67809 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.07■□□□□ 0.96
YBX1P67809 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
YBX1P67809 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.07■□□□□ 0.96
YBX1P67809 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
YBX1P67809 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
YBX1P67809 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
YBX1P67809 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.07■□□□□ 0.96
YBX1P67809 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
YBX1P67809 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
YBX1P67809 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.07■□□□□ 0.96
YBX1P67809 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
YBX1P67809 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.06■□□□□ 0.96
YBX1P67809 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.06■□□□□ 0.96
YBX1P67809 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
YBX1P67809 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.06■□□□□ 0.96
YBX1P67809 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.06■□□□□ 0.96
YBX1P67809 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.06■□□□□ 0.96
YBX1P67809 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.06■□□□□ 0.96
YBX1P67809 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
YBX1P67809 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
YBX1P67809 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YBX1P67809 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.06■□□□□ 0.96
YBX1P67809 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YBX1P67809 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
YBX1P67809 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
YBX1P67809 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
YBX1P67809 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.05■□□□□ 0.96
YBX1P67809 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YBX1P67809 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
YBX1P67809 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
YBX1P67809 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.05■□□□□ 0.96
YBX1P67809 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
YBX1P67809 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.05■□□□□ 0.96
YBX1P67809 ZNRF2P3-201ENST00000424200 374 ntBASIC21.05■□□□□ 0.96
YBX1P67809 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.05■□□□□ 0.96
YBX1P67809 AC105265.2-201ENST00000467189 838 ntBASIC21.05■□□□□ 0.96
YBX1P67809 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
YBX1P67809 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
YBX1P67809 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.05■□□□□ 0.96
YBX1P67809 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.05■□□□□ 0.96
YBX1P67809 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms