Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.78■□□□□ 0.6
SEC61A1P61619 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.78■□□□□ 0.6
SEC61A1P61619 AC106739.1-201ENST00000617035 715 ntBASIC18.78■□□□□ 0.6
SEC61A1P61619 C11orf96-202ENST00000528572 1834 ntBASIC18.78■□□□□ 0.6
SEC61A1P61619 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SEC61A1P61619 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.78■□□□□ 0.6
SEC61A1P61619 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEC61A1P61619 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.77■□□□□ 0.6
SEC61A1P61619 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEC61A1P61619 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEC61A1P61619 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SEC61A1P61619 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SEC61A1P61619 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEC61A1P61619 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SEC61A1P61619 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEC61A1P61619 AC024257.2-201ENST00000549699 147 ntBASIC18.77■□□□□ 0.6
SEC61A1P61619 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.77■□□□□ 0.6
SEC61A1P61619 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEC61A1P61619 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SEC61A1P61619 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEC61A1P61619 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.76■□□□□ 0.59
SEC61A1P61619 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEC61A1P61619 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SEC61A1P61619 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.76■□□□□ 0.59
SEC61A1P61619 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEC61A1P61619 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.76■□□□□ 0.59
SEC61A1P61619 AC005837.3-201ENST00000612163 286 ntBASIC18.76■□□□□ 0.59
SEC61A1P61619 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SEC61A1P61619 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEC61A1P61619 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEC61A1P61619 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.76■□□□□ 0.59
SEC61A1P61619 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SEC61A1P61619 AC135279.3-201ENST00000610945 1311 ntBASIC18.75■□□□□ 0.59
SEC61A1P61619 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SEC61A1P61619 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 AC006455.2-201ENST00000429931 906 ntBASIC18.75■□□□□ 0.59
SEC61A1P61619 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.75■□□□□ 0.59
SEC61A1P61619 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.75■□□□□ 0.59
SEC61A1P61619 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SEC61A1P61619 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SEC61A1P61619 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SEC61A1P61619 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEC61A1P61619 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SEC61A1P61619 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.74■□□□□ 0.59
SEC61A1P61619 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 SYT6-210ENST00000641643 1587 ntBASIC18.74■□□□□ 0.59
SEC61A1P61619 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SEC61A1P61619 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
SEC61A1P61619 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.74■□□□□ 0.59
SEC61A1P61619 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.74■□□□□ 0.59
SEC61A1P61619 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SEC61A1P61619 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.74■□□□□ 0.59
SEC61A1P61619 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.74■□□□□ 0.59
SEC61A1P61619 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.74■□□□□ 0.59
SEC61A1P61619 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.74■□□□□ 0.59
SEC61A1P61619 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SEC61A1P61619 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEC61A1P61619 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SEC61A1P61619 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 RNF165-205ENST00000588679 2904 ntBASIC18.73■□□□□ 0.59
SEC61A1P61619 AC026310.3-201ENST00000625186 2373 ntBASIC18.73■□□□□ 0.59
SEC61A1P61619 SERBP1P1-201ENST00000396021 1160 ntBASIC18.73■□□□□ 0.59
SEC61A1P61619 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.73■□□□□ 0.59
SEC61A1P61619 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SEC61A1P61619 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SEC61A1P61619 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEC61A1P61619 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms