Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
EIF3EP60228 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.3■■□□□ 1.16
EIF3EP60228 AC010525.1-201ENST00000585559 441 ntBASIC22.3■■□□□ 1.16
EIF3EP60228 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.3■■□□□ 1.16
EIF3EP60228 AC068587.7-201ENST00000641602 218 ntBASIC22.3■■□□□ 1.16
EIF3EP60228 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EIF3EP60228 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.3■■□□□ 1.16
EIF3EP60228 SYT6-210ENST00000641643 1587 ntBASIC22.29■■□□□ 1.16
EIF3EP60228 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
EIF3EP60228 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
EIF3EP60228 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
EIF3EP60228 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.29■■□□□ 1.16
EIF3EP60228 SERBP1P1-201ENST00000396021 1160 ntBASIC22.29■■□□□ 1.16
EIF3EP60228 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
EIF3EP60228 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
EIF3EP60228 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.28■■□□□ 1.16
EIF3EP60228 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
EIF3EP60228 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.28■■□□□ 1.16
EIF3EP60228 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EIF3EP60228 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
EIF3EP60228 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
EIF3EP60228 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
EIF3EP60228 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EIF3EP60228 AC131281.2-201ENST00000520478 145 ntBASIC22.28■■□□□ 1.16
EIF3EP60228 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.28■■□□□ 1.16
EIF3EP60228 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.28■■□□□ 1.16
EIF3EP60228 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EIF3EP60228 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EIF3EP60228 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.27■■□□□ 1.16
EIF3EP60228 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.27■■□□□ 1.16
EIF3EP60228 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.27■■□□□ 1.16
EIF3EP60228 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.27■■□□□ 1.16
EIF3EP60228 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 OR7E47P-201ENST00000546390 1422 ntBASIC22.27■■□□□ 1.16
EIF3EP60228 DUX4L19-201ENST00000557448 1267 ntBASIC22.27■■□□□ 1.16
EIF3EP60228 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.27■■□□□ 1.16
EIF3EP60228 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.27■■□□□ 1.16
EIF3EP60228 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EIF3EP60228 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.15
EIF3EP60228 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
EIF3EP60228 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
EIF3EP60228 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.26■■□□□ 1.15
EIF3EP60228 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
EIF3EP60228 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.26■■□□□ 1.15
EIF3EP60228 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
EIF3EP60228 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.26■■□□□ 1.15
EIF3EP60228 AL138724.1-201ENST00000606771 1088 ntBASIC22.26■■□□□ 1.15
EIF3EP60228 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.26■■□□□ 1.15
EIF3EP60228 AC087239.1-201ENST00000622671 572 ntBASIC22.26■■□□□ 1.15
EIF3EP60228 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
EIF3EP60228 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
EIF3EP60228 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
EIF3EP60228 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.26■■□□□ 1.15
EIF3EP60228 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
EIF3EP60228 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
EIF3EP60228 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.26■■□□□ 1.15
EIF3EP60228 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
EIF3EP60228 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
EIF3EP60228 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.25■■□□□ 1.15
EIF3EP60228 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.25■■□□□ 1.15
EIF3EP60228 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
EIF3EP60228 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
EIF3EP60228 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
EIF3EP60228 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
EIF3EP60228 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
EIF3EP60228 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
EIF3EP60228 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
EIF3EP60228 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
EIF3EP60228 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
EIF3EP60228 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
EIF3EP60228 AC010141.3-201ENST00000456659 717 ntBASIC22.24■■□□□ 1.15
EIF3EP60228 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
EIF3EP60228 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.24■■□□□ 1.15
EIF3EP60228 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.24■■□□□ 1.15
EIF3EP60228 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
EIF3EP60228 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.24■■□□□ 1.15
EIF3EP60228 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.24■■□□□ 1.15
EIF3EP60228 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.24■■□□□ 1.15
EIF3EP60228 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.24■■□□□ 1.15
EIF3EP60228 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
EIF3EP60228 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
EIF3EP60228 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
EIF3EP60228 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.23■■□□□ 1.15
EIF3EP60228 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EIF3EP60228 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EIF3EP60228 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
EIF3EP60228 AL137060.1-201ENST00000618151 2648 ntBASIC22.23■■□□□ 1.15
EIF3EP60228 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.23■■□□□ 1.15
EIF3EP60228 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EIF3EP60228 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.23■■□□□ 1.15
EIF3EP60228 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EIF3EP60228 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EIF3EP60228 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
EIF3EP60228 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms