Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.36■□□□□ 0.69
CLDN18P56856 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN18P56856 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN18P56856 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.36■□□□□ 0.69
CLDN18P56856 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.36■□□□□ 0.69
CLDN18P56856 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CLDN18P56856 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLDN18P56856 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN18P56856 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLDN18P56856 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN18P56856 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.35■□□□□ 0.69
CLDN18P56856 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLDN18P56856 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN18P56856 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN18P56856 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 AP004607.7-201ENST00000527152 1677 ntBASIC19.34■□□□□ 0.69
CLDN18P56856 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN18P56856 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDN18P56856 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CLDN18P56856 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN18P56856 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN18P56856 KRT18P61-201ENST00000585825 1298 ntBASIC19.34■□□□□ 0.69
CLDN18P56856 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 ESRRAP2-201ENST00000418437 1549 ntBASIC19.34■□□□□ 0.69
CLDN18P56856 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLDN18P56856 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN18P56856 AC139530.1-201ENST00000575312 1977 ntBASIC19.33■□□□□ 0.69
CLDN18P56856 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN18P56856 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.33■□□□□ 0.69
CLDN18P56856 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN18P56856 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN18P56856 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLDN18P56856 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.33■□□□□ 0.68
CLDN18P56856 AC022517.1-201ENST00000592429 346 ntBASIC19.33■□□□□ 0.68
CLDN18P56856 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN18P56856 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN18P56856 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN18P56856 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN18P56856 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN18P56856 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN18P56856 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN18P56856 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN18P56856 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN18P56856 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN18P56856 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLDN18P56856 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLDN18P56856 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN18P56856 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN18P56856 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN18P56856 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLDN18P56856 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN18P56856 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN18P56856 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN18P56856 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN18P56856 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLDN18P56856 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN18P56856 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN18P56856 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLDN18P56856 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN18P56856 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN18P56856 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN18P56856 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN18P56856 AL034346.1-201ENST00000568244 1277 ntBASIC19.31■□□□□ 0.68
CLDN18P56856 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN18P56856 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN18P56856 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLDN18P56856 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN18P56856 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN18P56856 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN18P56856 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN18P56856 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN18P56856 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 AP004607.4-201ENST00000530158 1459 ntBASIC19.3■□□□□ 0.68
CLDN18P56856 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN18P56856 AC079140.4-201ENST00000507448 529 ntBASIC19.3■□□□□ 0.68
CLDN18P56856 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN18P56856 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN18P56856 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN18P56856 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN18P56856 AC004854.2-201ENST00000608450 1441 ntBASIC19.3■□□□□ 0.68
CLDN18P56856 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms