Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXG1P55316 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19■□□□□ 0.63
FOXG1P55316 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FOXG1P55316 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXG1P55316 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
FOXG1P55316 OR7E47P-201ENST00000546390 1422 ntBASIC19■□□□□ 0.63
FOXG1P55316 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXG1P55316 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.99■□□□□ 0.63
FOXG1P55316 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXG1P55316 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXG1P55316 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXG1P55316 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXG1P55316 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
FOXG1P55316 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
FOXG1P55316 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.98■□□□□ 0.63
FOXG1P55316 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXG1P55316 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.98■□□□□ 0.63
FOXG1P55316 CCDC92B-201ENST00000575506 885 ntBASIC18.98■□□□□ 0.63
FOXG1P55316 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXG1P55316 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXG1P55316 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FOXG1P55316 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXG1P55316 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXG1P55316 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
FOXG1P55316 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 AC123595.1-201ENST00000440769 1046 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4L2-201ENST00000561772 1275 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4L6-201ENST00000626483 1275 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4L1-201ENST00000627662 1275 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4L8-201ENST00000629013 1275 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4L3-201ENST00000630187 1275 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4L7-201ENST00000630678 1275 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 DUX4L5-201ENST00000630834 1275 ntBASIC18.97■□□□□ 0.63
FOXG1P55316 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
FOXG1P55316 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
FOXG1P55316 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
FOXG1P55316 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.97■□□□□ 0.63
FOXG1P55316 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXG1P55316 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXG1P55316 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXG1P55316 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FOXG1P55316 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXG1P55316 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXG1P55316 GUSBP5-202ENST00000510805 1989 ntBASIC18.95■□□□□ 0.62
FOXG1P55316 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 AP004607.7-201ENST00000527152 1677 ntBASIC18.95■□□□□ 0.62
FOXG1P55316 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXG1P55316 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
FOXG1P55316 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXG1P55316 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXG1P55316 LINC02228-203ENST00000641970 1355 ntBASIC18.94■□□□□ 0.62
FOXG1P55316 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.94■□□□□ 0.62
FOXG1P55316 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms