Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
PRRX1P54821 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.74■□□□□ 0.43
PRRX1P54821 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRRX1P54821 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRRX1P54821 RASA4CP-201ENST00000424092 1398 ntBASIC17.74■□□□□ 0.43
PRRX1P54821 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRRX1P54821 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRRX1P54821 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
PRRX1P54821 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 AC242852.2-201ENST00000615738 1807 ntBASIC17.73■□□□□ 0.43
PRRX1P54821 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.73■□□□□ 0.43
PRRX1P54821 AC091305.1-201ENST00000479476 895 ntBASIC17.73■□□□□ 0.43
PRRX1P54821 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PRRX1P54821 GUSBP5-202ENST00000510805 1989 ntBASIC17.73■□□□□ 0.43
PRRX1P54821 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRRX1P54821 OXCT2P1-201ENST00000447263 1535 ntBASIC17.72■□□□□ 0.43
PRRX1P54821 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PRRX1P54821 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PRRX1P54821 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRRX1P54821 AP001330.3-201ENST00000520123 633 ntBASIC17.72■□□□□ 0.43
PRRX1P54821 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.72■□□□□ 0.43
PRRX1P54821 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.72■□□□□ 0.43
PRRX1P54821 AF213884.3-201ENST00000563833 479 ntBASIC17.72■□□□□ 0.43
PRRX1P54821 AC142381.2-201ENST00000566120 298 ntBASIC17.72■□□□□ 0.43
PRRX1P54821 AC005837.3-201ENST00000612163 286 ntBASIC17.72■□□□□ 0.43
PRRX1P54821 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRRX1P54821 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRRX1P54821 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
PRRX1P54821 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PRRX1P54821 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRRX1P54821 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRRX1P54821 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 AC137767.1-201ENST00000602918 1920 ntBASIC17.71■□□□□ 0.43
PRRX1P54821 AL117328.2-201ENST00000624617 1940 ntBASIC17.71■□□□□ 0.43
PRRX1P54821 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 MIR939-201ENST00000401314 82 ntBASIC17.71■□□□□ 0.43
PRRX1P54821 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PRRX1P54821 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.71■□□□□ 0.43
PRRX1P54821 AL136967.2-201ENST00000623968 743 ntBASIC17.71■□□□□ 0.43
PRRX1P54821 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.71■□□□□ 0.43
PRRX1P54821 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
PRRX1P54821 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRRX1P54821 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRRX1P54821 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRRX1P54821 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PRRX1P54821 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PRRX1P54821 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PRRX1P54821 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
PRRX1P54821 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.7■□□□□ 0.42
PRRX1P54821 IGHV3-19-201ENST00000521488 291 ntBASIC17.7■□□□□ 0.42
PRRX1P54821 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.7■□□□□ 0.42
PRRX1P54821 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PRRX1P54821 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRRX1P54821 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PRRX1P54821 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.69■□□□□ 0.42
PRRX1P54821 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.69■□□□□ 0.42
PRRX1P54821 SUDS3P1-201ENST00000505831 966 ntBASIC17.69■□□□□ 0.42
PRRX1P54821 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.69■□□□□ 0.42
PRRX1P54821 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 OR7E47P-201ENST00000546390 1422 ntBASIC17.69■□□□□ 0.42
PRRX1P54821 AC139530.1-201ENST00000575312 1977 ntBASIC17.69■□□□□ 0.42
PRRX1P54821 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.69■□□□□ 0.42
PRRX1P54821 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRRX1P54821 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRRX1P54821 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms