Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LIMK2P53671 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.79■■□□□ 1.08
LIMK2P53671 AL499627.2-201ENST00000606283 725 ntBASIC21.79■■□□□ 1.08
LIMK2P53671 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.79■■□□□ 1.08
LIMK2P53671 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.79■■□□□ 1.08
LIMK2P53671 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.79■■□□□ 1.08
LIMK2P53671 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.79■■□□□ 1.08
LIMK2P53671 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LIMK2P53671 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.79■■□□□ 1.08
LIMK2P53671 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
LIMK2P53671 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.78■■□□□ 1.08
LIMK2P53671 AC027682.1-201ENST00000562846 899 ntBASIC21.78■■□□□ 1.08
LIMK2P53671 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LIMK2P53671 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIMK2P53671 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.78■■□□□ 1.08
LIMK2P53671 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LIMK2P53671 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LIMK2P53671 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.77■■□□□ 1.08
LIMK2P53671 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LIMK2P53671 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.77■■□□□ 1.08
LIMK2P53671 AC136469.2-201ENST00000623944 1028 ntBASIC21.77■■□□□ 1.08
LIMK2P53671 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
LIMK2P53671 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LIMK2P53671 AC010542.4-201ENST00000563151 1910 ntBASIC21.76■■□□□ 1.07
LIMK2P53671 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.76■■□□□ 1.07
LIMK2P53671 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 AC006455.2-201ENST00000429931 906 ntBASIC21.76■■□□□ 1.07
LIMK2P53671 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.76■■□□□ 1.07
LIMK2P53671 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.76■■□□□ 1.07
LIMK2P53671 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.76■■□□□ 1.07
LIMK2P53671 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.76■■□□□ 1.07
LIMK2P53671 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIMK2P53671 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.76■■□□□ 1.07
LIMK2P53671 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.76■■□□□ 1.07
LIMK2P53671 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.75■■□□□ 1.07
LIMK2P53671 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
LIMK2P53671 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LIMK2P53671 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LIMK2P53671 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.75■■□□□ 1.07
LIMK2P53671 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LIMK2P53671 AC008764.7-201ENST00000593779 1081 ntBASIC21.75■■□□□ 1.07
LIMK2P53671 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
LIMK2P53671 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LIMK2P53671 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LIMK2P53671 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LIMK2P53671 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LIMK2P53671 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.74■■□□□ 1.07
LIMK2P53671 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LIMK2P53671 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LIMK2P53671 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LIMK2P53671 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.74■■□□□ 1.07
LIMK2P53671 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LIMK2P53671 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LIMK2P53671 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.73■■□□□ 1.07
LIMK2P53671 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LIMK2P53671 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LIMK2P53671 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.73■■□□□ 1.07
LIMK2P53671 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LIMK2P53671 MIR3181-201ENST00000578512 73 ntBASIC21.73■■□□□ 1.07
LIMK2P53671 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LIMK2P53671 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LIMK2P53671 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LIMK2P53671 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.72■■□□□ 1.07
LIMK2P53671 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.72■■□□□ 1.07
LIMK2P53671 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LIMK2P53671 AC099791.1-201ENST00000416440 715 ntBASIC21.72■■□□□ 1.07
LIMK2P53671 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.72■■□□□ 1.07
LIMK2P53671 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.72■■□□□ 1.07
LIMK2P53671 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.72■■□□□ 1.07
LIMK2P53671 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms