Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
HMGA2P52926 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
HMGA2P52926 AC026471.6-201ENST00000622954 1905 ntBASIC19.76■□□□□ 0.75
HMGA2P52926 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGA2P52926 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HMGA2P52926 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 AF106564.1-201ENST00000607058 2553 ntBASIC19.76■□□□□ 0.75
HMGA2P52926 SLC25A24-204ENST00000569674 2357 ntBASIC19.76■□□□□ 0.75
HMGA2P52926 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HMGA2P52926 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGA2P52926 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HMGA2P52926 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HMGA2P52926 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HMGA2P52926 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGA2P52926 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HMGA2P52926 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGA2P52926 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HMGA2P52926 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGA2P52926 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGA2P52926 AC010997.5-201ENST00000609182 354 ntBASIC19.75■□□□□ 0.75
HMGA2P52926 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGA2P52926 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
HMGA2P52926 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGA2P52926 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HMGA2P52926 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGA2P52926 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGA2P52926 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 MIR4787-201ENST00000607364 84 ntBASIC19.74■□□□□ 0.75
HMGA2P52926 AC241377.3-202ENST00000626088 1088 ntBASIC19.74■□□□□ 0.75
HMGA2P52926 AC241585.3-202ENST00000628937 1088 ntBASIC19.74■□□□□ 0.75
HMGA2P52926 AC245100.8-202ENST00000629247 1058 ntBASIC19.74■□□□□ 0.75
HMGA2P52926 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.74■□□□□ 0.75
HMGA2P52926 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.74■□□□□ 0.75
HMGA2P52926 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.74■□□□□ 0.75
HMGA2P52926 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGA2P52926 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGA2P52926 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGA2P52926 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGA2P52926 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 AC104564.3-201ENST00000582367 638 ntBASIC19.73■□□□□ 0.75
HMGA2P52926 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGA2P52926 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGA2P52926 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGA2P52926 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HMGA2P52926 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGA2P52926 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGA2P52926 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HMGA2P52926 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGA2P52926 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGA2P52926 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGA2P52926 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HMGA2P52926 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGA2P52926 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGA2P52926 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGA2P52926 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGA2P52926 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGA2P52926 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGA2P52926 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGA2P52926 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
HMGA2P52926 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGA2P52926 OR7E47P-201ENST00000546390 1422 ntBASIC19.71■□□□□ 0.75
HMGA2P52926 AC073130.3-201ENST00000624389 2278 ntBASIC19.71■□□□□ 0.75
HMGA2P52926 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
HMGA2P52926 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGA2P52926 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGA2P52926 AC133637.1-201ENST00000624115 1537 ntBASIC19.71■□□□□ 0.75
HMGA2P52926 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGA2P52926 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HMGA2P52926 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGA2P52926 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HMGA2P52926 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGA2P52926 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
HMGA2P52926 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGA2P52926 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGA2P52926 AL451085.2-201ENST00000605085 799 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms