Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RAB5CP51148 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RAB5CP51148 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB5CP51148 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5CP51148 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RAB5CP51148 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB5CP51148 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 AL162393.1-201ENST00000437852 946 ntBASIC17.35■□□□□ 0.37
RAB5CP51148 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RAB5CP51148 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB5CP51148 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB5CP51148 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5CP51148 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5CP51148 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RAB5CP51148 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5CP51148 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAB5CP51148 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5CP51148 AL592295.1-201ENST00000400984 884 ntBASIC17.34■□□□□ 0.37
RAB5CP51148 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB5CP51148 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB5CP51148 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5CP51148 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB5CP51148 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5CP51148 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB5CP51148 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAB5CP51148 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5CP51148 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB5CP51148 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB5CP51148 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB5CP51148 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5CP51148 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5CP51148 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5CP51148 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB5CP51148 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5CP51148 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5CP51148 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5CP51148 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB5CP51148 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB5CP51148 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB5CP51148 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB5CP51148 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB5CP51148 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB5CP51148 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB5CP51148 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB5CP51148 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB5CP51148 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB5CP51148 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB5CP51148 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5CP51148 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RAB5CP51148 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RAB5CP51148 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.31■□□□□ 0.36
RAB5CP51148 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB5CP51148 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB5CP51148 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 FEM1AP1-201ENST00000431297 1995 ntBASIC17.31■□□□□ 0.36
RAB5CP51148 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB5CP51148 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5CP51148 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAB5CP51148 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5CP51148 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5CP51148 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB5CP51148 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB5CP51148 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RAB5CP51148 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB5CP51148 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms