Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.48■□□□□ 0.87
PRIM2P49643 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRIM2P49643 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.48■□□□□ 0.87
PRIM2P49643 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.48■□□□□ 0.87
PRIM2P49643 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRIM2P49643 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRIM2P49643 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRIM2P49643 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.48■□□□□ 0.87
PRIM2P49643 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.48■□□□□ 0.87
PRIM2P49643 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PRIM2P49643 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRIM2P49643 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRIM2P49643 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.48■□□□□ 0.87
PRIM2P49643 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.48■□□□□ 0.87
PRIM2P49643 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.48■□□□□ 0.87
PRIM2P49643 AC133637.1-201ENST00000624115 1537 ntBASIC20.48■□□□□ 0.87
PRIM2P49643 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRIM2P49643 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRIM2P49643 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRIM2P49643 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PRIM2P49643 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRIM2P49643 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRIM2P49643 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.47■□□□□ 0.87
PRIM2P49643 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRIM2P49643 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.46■□□□□ 0.87
PRIM2P49643 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRIM2P49643 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.46■□□□□ 0.87
PRIM2P49643 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRIM2P49643 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRIM2P49643 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRIM2P49643 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.45■□□□□ 0.86
PRIM2P49643 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.45■□□□□ 0.86
PRIM2P49643 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.45■□□□□ 0.86
PRIM2P49643 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.45■□□□□ 0.86
PRIM2P49643 AC131212.1-201ENST00000613771 668 ntBASIC20.45■□□□□ 0.86
PRIM2P49643 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.45■□□□□ 0.86
PRIM2P49643 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRIM2P49643 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.45■□□□□ 0.86
PRIM2P49643 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRIM2P49643 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.44■□□□□ 0.86
PRIM2P49643 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PRIM2P49643 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.44■□□□□ 0.86
PRIM2P49643 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.44■□□□□ 0.86
PRIM2P49643 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.44■□□□□ 0.86
PRIM2P49643 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.44■□□□□ 0.86
PRIM2P49643 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.44■□□□□ 0.86
PRIM2P49643 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRIM2P49643 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PRIM2P49643 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PRIM2P49643 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.43■□□□□ 0.86
PRIM2P49643 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PRIM2P49643 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 DUX4L19-201ENST00000557448 1267 ntBASIC20.43■□□□□ 0.86
PRIM2P49643 MIR3181-201ENST00000578512 73 ntBASIC20.43■□□□□ 0.86
PRIM2P49643 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.43■□□□□ 0.86
PRIM2P49643 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.43■□□□□ 0.86
PRIM2P49643 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.43■□□□□ 0.86
PRIM2P49643 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRIM2P49643 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.42■□□□□ 0.86
PRIM2P49643 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms