Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC9A3P48764 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SLC9A3P48764 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC9A3P48764 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC9A3P48764 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC9A3P48764 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC9A3P48764 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC9A3P48764 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC9A3P48764 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC9A3P48764 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC9A3P48764 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC9A3P48764 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC9A3P48764 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC9A3P48764 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC9A3P48764 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC9A3P48764 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC9A3P48764 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC9A3P48764 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC9A3P48764 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC9A3P48764 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC9A3P48764 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC9A3P48764 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC9A3P48764 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC9A3P48764 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC9A3P48764 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC9A3P48764 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC9A3P48764 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC9A3P48764 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC9A3P48764 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC9A3P48764 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC9A3P48764 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC9A3P48764 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC9A3P48764 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC9A3P48764 AL035685.1-201ENST00000636663 812 ntBASIC19.7■□□□□ 0.74
SLC9A3P48764 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC9A3P48764 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC9A3P48764 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC9A3P48764 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.7■□□□□ 0.74
SLC9A3P48764 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC9A3P48764 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SLC9A3P48764 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC9A3P48764 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 AL356740.2-201ENST00000601559 647 ntBASIC19.69■□□□□ 0.74
SLC9A3P48764 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC9A3P48764 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC9A3P48764 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC9A3P48764 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC9A3P48764 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC9A3P48764 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC9A3P48764 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC9A3P48764 AC026310.3-201ENST00000625186 2373 ntBASIC19.68■□□□□ 0.74
SLC9A3P48764 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC9A3P48764 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC9A3P48764 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC9A3P48764 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC9A3P48764 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC9A3P48764 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC9A3P48764 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC9A3P48764 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC9A3P48764 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC9A3P48764 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC9A3P48764 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SLC9A3P48764 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.67■□□□□ 0.74
SLC9A3P48764 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC9A3P48764 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC9A3P48764 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC9A3P48764 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SLC9A3P48764 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.67■□□□□ 0.74
SLC9A3P48764 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC9A3P48764 AC133637.1-201ENST00000624115 1537 ntBASIC19.66■□□□□ 0.74
SLC9A3P48764 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC9A3P48764 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC9A3P48764 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms