Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SLC6A12P48065 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.94■□□□□ 0.94
SLC6A12P48065 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.94■□□□□ 0.94
SLC6A12P48065 PBX2P1-201ENST00000493219 1291 ntBASIC20.94■□□□□ 0.94
SLC6A12P48065 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A12P48065 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A12P48065 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.94■□□□□ 0.94
SLC6A12P48065 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
SLC6A12P48065 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A12P48065 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A12P48065 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A12P48065 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A12P48065 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A12P48065 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A12P48065 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC6A12P48065 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A12P48065 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A12P48065 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC6A12P48065 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SLC6A12P48065 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC6A12P48065 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A12P48065 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A12P48065 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A12P48065 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A12P48065 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A12P48065 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A12P48065 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A12P48065 FBXW4P1-201ENST00000426721 2239 ntBASIC20.91■□□□□ 0.94
SLC6A12P48065 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A12P48065 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SLC6A12P48065 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC6A12P48065 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC6A12P48065 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC6A12P48065 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC6A12P48065 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC6A12P48065 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SLC6A12P48065 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC6A12P48065 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC6A12P48065 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLC6A12P48065 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A12P48065 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A12P48065 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC6A12P48065 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A12P48065 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A12P48065 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A12P48065 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A12P48065 EDA-201ENST00000338901 1233 ntBASIC20.89■□□□□ 0.93
SLC6A12P48065 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC6A12P48065 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A12P48065 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC6A12P48065 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.89■□□□□ 0.93
SLC6A12P48065 AP001330.3-201ENST00000520123 633 ntBASIC20.89■□□□□ 0.93
SLC6A12P48065 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A12P48065 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.89■□□□□ 0.93
SLC6A12P48065 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC6A12P48065 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A12P48065 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SLC6A12P48065 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A12P48065 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A12P48065 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC6A12P48065 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A12P48065 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A12P48065 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A12P48065 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A12P48065 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A12P48065 IGHV3-19-201ENST00000521488 291 ntBASIC20.88■□□□□ 0.93
SLC6A12P48065 AC027682.1-201ENST00000562846 899 ntBASIC20.88■□□□□ 0.93
SLC6A12P48065 AC126544.1-201ENST00000580842 1059 ntBASIC20.88■□□□□ 0.93
SLC6A12P48065 AC008764.7-201ENST00000593779 1081 ntBASIC20.88■□□□□ 0.93
SLC6A12P48065 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC6A12P48065 AL031432.3-201ENST00000607698 485 ntBASIC20.88■□□□□ 0.93
SLC6A12P48065 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC6A12P48065 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A12P48065 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A12P48065 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC6A12P48065 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.88■□□□□ 0.93
SLC6A12P48065 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms