Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
RPL28P46779 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RPL28P46779 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPL28P46779 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RPL28P46779 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.19□□□□□ -0.14
RPL28P46779 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL28P46779 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPL28P46779 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL28P46779 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL28P46779 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.19□□□□□ -0.14
RPL28P46779 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL28P46779 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL28P46779 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RPL28P46779 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 KRT8P33-201ENST00000508125 1423 ntBASIC14.18□□□□□ -0.14
RPL28P46779 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.18□□□□□ -0.14
RPL28P46779 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL28P46779 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL28P46779 PVT1_1.1-201ENST00000615125 194 ntBASIC14.18□□□□□ -0.14
RPL28P46779 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL28P46779 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL28P46779 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL28P46779 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.17□□□□□ -0.14
RPL28P46779 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RPL28P46779 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL28P46779 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.17□□□□□ -0.14
RPL28P46779 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
RPL28P46779 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.17□□□□□ -0.14
RPL28P46779 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL28P46779 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL28P46779 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
RPL28P46779 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RPL28P46779 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL28P46779 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL28P46779 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.16□□□□□ -0.14
RPL28P46779 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.16□□□□□ -0.14
RPL28P46779 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.16□□□□□ -0.14
RPL28P46779 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.16□□□□□ -0.14
RPL28P46779 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL28P46779 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL28P46779 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL28P46779 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL28P46779 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL28P46779 Z98882.1-201ENST00000622160 2253 ntBASIC14.15□□□□□ -0.14
RPL28P46779 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL28P46779 FEM1AP4-201ENST00000443167 1987 ntBASIC14.15□□□□□ -0.14
RPL28P46779 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.15□□□□□ -0.14
RPL28P46779 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RPL28P46779 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL28P46779 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RPL28P46779 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL28P46779 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.14□□□□□ -0.15
RPL28P46779 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPL28P46779 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.14□□□□□ -0.15
RPL28P46779 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RPL28P46779 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPL28P46779 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.14□□□□□ -0.15
RPL28P46779 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms