Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.57■■□□□ 1.04
HMGCLP35914 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HMGCLP35914 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HMGCLP35914 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.57■■□□□ 1.04
HMGCLP35914 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGCLP35914 AC012414.1-201ENST00000556676 535 ntBASIC21.57■■□□□ 1.04
HMGCLP35914 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.57■■□□□ 1.04
HMGCLP35914 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HMGCLP35914 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.57■■□□□ 1.04
HMGCLP35914 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGCLP35914 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLP35914 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.56■■□□□ 1.04
HMGCLP35914 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.56■■□□□ 1.04
HMGCLP35914 AL354811.1-201ENST00000610286 706 ntBASIC21.56■■□□□ 1.04
HMGCLP35914 AL358852.1-201ENST00000623174 1268 ntBASIC21.56■■□□□ 1.04
HMGCLP35914 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HMGCLP35914 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLP35914 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLP35914 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HMGCLP35914 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HMGCLP35914 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCLP35914 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 ZNRF2P3-201ENST00000424200 374 ntBASIC21.55■■□□□ 1.04
HMGCLP35914 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.55■■□□□ 1.04
HMGCLP35914 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCLP35914 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
HMGCLP35914 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLP35914 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 AL034346.1-201ENST00000568244 1277 ntBASIC21.54■■□□□ 1.04
HMGCLP35914 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLP35914 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLP35914 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGCLP35914 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.53■■□□□ 1.04
HMGCLP35914 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.53■■□□□ 1.04
HMGCLP35914 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGCLP35914 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.53■■□□□ 1.04
HMGCLP35914 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGCLP35914 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
HMGCLP35914 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.53■■□□□ 1.04
HMGCLP35914 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.52■■□□□ 1.04
HMGCLP35914 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.52■■□□□ 1.04
HMGCLP35914 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.52■■□□□ 1.04
HMGCLP35914 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HMGCLP35914 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
HMGCLP35914 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms