Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
SOX11P35716 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX11P35716 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.98■□□□□ 0.95
SOX11P35716 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SOX11P35716 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SOX11P35716 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX11P35716 SERBP1P1-201ENST00000396021 1160 ntBASIC20.98■□□□□ 0.95
SOX11P35716 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SOX11P35716 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.98■□□□□ 0.95
SOX11P35716 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.98■□□□□ 0.95
SOX11P35716 AC099791.2-201ENST00000605725 427 ntBASIC20.98■□□□□ 0.95
SOX11P35716 AC092053.2-201ENST00000640557 1818 ntBASIC20.98■□□□□ 0.95
SOX11P35716 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX11P35716 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.98■□□□□ 0.95
SOX11P35716 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SOX11P35716 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SOX11P35716 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX11P35716 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SOX11P35716 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX11P35716 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX11P35716 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.97■□□□□ 0.95
SOX11P35716 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX11P35716 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX11P35716 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX11P35716 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SOX11P35716 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX11P35716 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.97■□□□□ 0.95
SOX11P35716 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
SOX11P35716 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.97■□□□□ 0.95
SOX11P35716 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX11P35716 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SOX11P35716 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SOX11P35716 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX11P35716 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX11P35716 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SOX11P35716 MIR939-201ENST00000401314 82 ntBASIC20.96■□□□□ 0.95
SOX11P35716 AF213884.3-201ENST00000563833 479 ntBASIC20.96■□□□□ 0.95
SOX11P35716 AL138724.1-201ENST00000606771 1088 ntBASIC20.96■□□□□ 0.95
SOX11P35716 AL136967.2-201ENST00000623968 743 ntBASIC20.96■□□□□ 0.95
SOX11P35716 AL024507.2-201ENST00000606070 2574 ntBASIC20.96■□□□□ 0.95
SOX11P35716 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.96■□□□□ 0.95
SOX11P35716 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX11P35716 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX11P35716 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX11P35716 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SOX11P35716 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX11P35716 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX11P35716 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX11P35716 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX11P35716 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.95■□□□□ 0.94
SOX11P35716 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.95■□□□□ 0.94
SOX11P35716 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.95■□□□□ 0.94
SOX11P35716 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.95■□□□□ 0.94
SOX11P35716 AP001330.3-201ENST00000520123 633 ntBASIC20.95■□□□□ 0.94
SOX11P35716 MIR4767-201ENST00000582827 78 ntBASIC20.95■□□□□ 0.94
SOX11P35716 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.95■□□□□ 0.94
SOX11P35716 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SOX11P35716 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SOX11P35716 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.95■□□□□ 0.94
SOX11P35716 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.95■□□□□ 0.94
SOX11P35716 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SOX11P35716 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SOX11P35716 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SOX11P35716 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.94■□□□□ 0.94
SOX11P35716 AC011298.3-201ENST00000615796 283 ntBASIC20.94■□□□□ 0.94
SOX11P35716 AC241377.3-202ENST00000626088 1088 ntBASIC20.94■□□□□ 0.94
SOX11P35716 AC241585.3-202ENST00000628937 1088 ntBASIC20.94■□□□□ 0.94
SOX11P35716 AC245100.8-202ENST00000629247 1058 ntBASIC20.94■□□□□ 0.94
SOX11P35716 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SOX11P35716 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SOX11P35716 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOX11P35716 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SOX11P35716 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX11P35716 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX11P35716 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.93■□□□□ 0.94
SOX11P35716 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SOX11P35716 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.93■□□□□ 0.94
SOX11P35716 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX11P35716 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOX11P35716 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.93■□□□□ 0.94
SOX11P35716 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX11P35716 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SOX11P35716 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX11P35716 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOX11P35716 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.92■□□□□ 0.94
SOX11P35716 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX11P35716 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX11P35716 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.92■□□□□ 0.94
SOX11P35716 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOX11P35716 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOX11P35716 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms